Return to main results Retrieve Phyre Job Id

Job DescriptionP39829
Confidence53.16%DateThu Jan 5 12:00:53 GMT 2012
Rank6Aligned Residues100
% Identity17%Templatec1tt9B_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer
Resolution3.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.. .......80........ .90.........100.........110.........120.........130...... .
Predicted Secondary structure  ....






.
































..
Query SS confidence 







. . . .















.















































. .
Query Sequence  EIIRYGEV. . . . IGYAVRAIPRGSWIDE. SMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLL. . G
Query Conservation   
 


  ....

 
   
  
  

 . 
                            

 

 
 

 

 

 
.. 
Alig confidence 







....















.












.......











.........






..
Template Conservation 




  

  
 
  
  



  
 
          

 
.......
       
 
 .........



  



Template Sequence  PVYLYGEAAQXPSRQTLPAIRAGEYEALPEKLKQAEWVPDFG. . . . . . . PSSFVPSWGATV. . . . . . . . . TGARKFLIAF
Template Known Secondary structure 
B


TTS

STTSSSTTTS
SSSGGGSSSSTT

SBS.......
S

BTTB


.........




Template Predicted Secondary structure 






















.......








.........



Template SS confidence 















































































   122.......130.........140.........150.........160... ......170..... ....180.....
 
   138.140.........150.........160. ........170.........180..
Predicted Secondary structure 



......















Query SS confidence 























. . . . . .




















Query Sequence  ITTSVHCVAGVVDYVVKIIERDLL. . . . . . PKYPNVDGVVGLNHLYGCGVA
Query Conservation 




 
   

  

  
   
 ......   
 




 
 
  


  
Alig confidence 







.










.


......




















Template Conservation 

 
 
 
.  
  

  

.  

     


  


 
         

Template Sequence  NINLLSTK. EQAHRIALNLR. EQGRGKDQPGRLKKVQGIGWYLEEKNLAQV
Template Known Secondary structure  SS
.S.SS
SSSSS

S
SSTTTT
Template Predicted Secondary structure 



..
















Template SS confidence 


















































   186...190... ......200.... .....210.........220.........230....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions