Job Description P39829 Confidence 11.21% Date Thu Jan 5 12:00:53 GMT 2012 Rank 72 Aligned Residues 136 % Identity 15% Template c1e1cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; PDBTitle: methylmalonyl-coa mutase h244a mutant Resolution 2.62 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	M	V	E	D	I	L	Q	I	A	E	R	H	L	Q	K	L	N	Q	R	Q	R	E	T	C	P	A	S	E	L	V	V	G	M	Q	C	G	G	S	D	A	F	S	G	V	T	A	N	P	A	V	G	Y	A	S	D	L	L	V	R	C	G	A	T	V	M	F	S	E	V	T	E	V	R	D	A	I	H	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		P	E	K	V	K	A	A	L	D	K	I	T	W	A	A	G	N	P	D	D	K	D	P	D	R	N	L	L	K	L	C	I	D	A	G	R	A	M	A	T	.	.	.	.	.	.	.	.	.	.	.	V	G	E	M	S	D	A	L	E	K	V	F	G	R	Y	T	A	Q	I	.	.	.	.	R	T	I	S	G	V
Template Known Secondary structure																		S			T	T		G	G	G												T	T			.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.					S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.												.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.					.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	T	P	R	A	V	N	E	E	V	G	K	R	L	L	E	E	M	E	W	Y	D	N	Y	L	N	M	G	K	T	D	R	S	A	N	P	S	P	G	N	K	K	G	G	L	A	N	V	V	E	K	A	L	G	S	I	A	K	S	G	K	S	A	I	V	E	V	L	S	P	G	Q	R	P	T	K	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	K	E	V	K	N	T	P	E	V	E	E	A	R	E	L	V	E	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	E	G	R	R	P	R	I	L	L	A	K	M	G	Q	D	G	H	D	R	G	Q	K
Template Known Secondary structure						T		S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S									B	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590																																			.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
											409	410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	L	I	Y	A	A	T	P	A	S	D	.	.	F	V	C	G	T	Q	Q	V	A	S	G	I	T	V	Q	V	F
Query Conservation		.	.	.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		V	I	A	T	A	Y	A	D	L	G	F	D	V	D	V	G	P	L	F	Q	T	P	E	E	T	A	R	Q	A	V	E	A	D	V	H	V	V	G	V
Template Known Secondary structure										T	T								T	T	B												T	T		S
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions