Job Description P0C093 Confidence 99.80% Date Thu Jan 5 11:29:51 GMT 2012 Rank 95 Aligned Residues 164 % Identity 13% Template c3o60A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	.	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T
Query Conservation																						.
Alig confidence														.								.																																																							.	.	.	.	.
Template Conservation														.																																																															.	.	.	.	.
Template Sequence		R	T	Q	K	T	Q	T	K	L	Y	T	V	.	L	E	R	F	Y	V	E	D	R	T	F	E	S	I	S	I	K	D	L	C	E	Q	A	R	V	S	R	A	T	F	Y	R	H	H	K	E	I	I	Q	V	I	E	V	Q	I	L	R	T	X	Q	Y	F	S	L	E	F	D	Q	I	I	L	T	.	.	.	.	.
Template Known Secondary structure														.							T	T			T	T	T											T											S	S	T																					T	S				.	.	.	.	.
Template Predicted Secondary structure														.																																																															.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F
Query Conservation
Alig confidence		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	K	E	N	I	Q	R	L	I	L	R	T	I	Q	K	N	P	L	L	F	Q	V	I	F	W	S	R	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	F	I	D	V	V	S	G	E	I	L	R	I	S	L	L	K	E	V	S	F	.	S	D	S	K	F	X	P	N	C	F	A	R	X
Template Known Secondary structure		.	.																										T			.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T				.	S	S	T	T
Template Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	S	L	A	A	E	I	Q	Q	S	N	K	D	Y	T	N	D	Q	L	V	E	L	I	Q	E	A	A
Template Known Secondary structure													S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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