Job Description P0C093 Confidence 99.85% Date Thu Jan 5 11:29:51 GMT 2012 Rank 67 Aligned Residues 186 % Identity 17% Template c3npiB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:tetr family regulatory protein; PDBTitle: crystal structure of a tetr family regulatory protein (dip1788) from2 corynebacterium diphtheriae at 2.96 a resolution Resolution 2.96 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R	L	R	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		S	T	D	T	V	L	D	I	.	A	L	S	L	F	S	E	L	G	F	S	D	A	K	L	E	A	I	A	K	K	S	G	X	S	K	R	X	I	H	Y	H	F	G	D	K	R	G	L	Y	I	C	C	L	E	E	A	V	R	R	L	R	P	T	A	E	E	X	Y	L	A	S	A	V	P	V	E	G	V	R	T
Template Known Secondary structure										.																																			S																	S			T	T	T	T			S
Template Predicted Secondary structure										.
Template SS confidence
		18	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	A	V	F	H	R	Y	V	Q	H	P	E	A	V	R	X	L	Q	X	E	N	L	H	H	Y	G	K	V	A	E	A	S	P	L	S	D	Q	S	A	I	T	L	Q	L	D	R	L	L	X	L	G	Q	D	A	G	A	F	R	P	G	I	S	A	Q	D	V	F	T	L	I	A	S	I	A	V	F	R	I
Template Known Secondary structure																										S		T	T			T	T	S			S	S																			T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		171						.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.													.	.	.
Query SS confidence			.	.	.	.	.													.	.	.
Query Sequence		S	.	.	.	.	.	R	F	V	R	S	E	F	K	Y	R	P	T	.	.	.	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation			.	.	.	.	.													.	.	.
Alig confidence			.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		N	S	R	S	T	T	L	N	L	Y	G	I	D	X	X	N	G	D	N	T	D	G	X	R	R	X	A	V	D	T	V	L	A	F	L
Template Known Secondary structure			T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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