Job Description P0C093 Confidence 99.87% Date Thu Jan 5 11:29:51 GMT 2012 Rank 46 Aligned Residues 184 % Identity 11% Template c3g7rB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of sco4454, a tetr-family transcriptional2 regulator from streptomyces coelicolor Resolution 1.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		A	A	A	R	T	P	S	E	A	R	A	R	L	L	G	T	.	A	T	R	I	F	Y	A	E	G	I	H	S	V	G	I	D	R	I	T	A	E	A	Q	V	T	R	A	T	L	Y	R	H	F	S	G	K	D	D	L	I	L	A	Y	L	D	Q	A	D	R	G	I	R	A	Q	V	T	A	A	R	G	S	S	P
Template Known Secondary structure																		.										S	T	T	S										T											S	S																										T		S
Template Predicted Secondary structure																		.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	.	.	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S
Query Conservation																								.	.
Alig confidence																								.	.																																						.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		A	A	D	G	Q	V	R	A	V	A	R	S	I	V	D	G	I	R	S	P	G	F	R	G	C	A	F	L	N	A	V	A	E	Y	P	D	P	A	H	P	V	H	R	A	V	L	A	H	R	Q	W	F	L	D	T	V	T	E	L	L	A	.	.	.	.	.	.	.	Q	V	G	D	G	D	G	V	A	A	G	R
Template Known Secondary structure		S																		S	T	T			S													T	T	S																							.	.	.	.	.	.	.	T	T	S	S	S		S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	A	F	C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L	Q
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		H	L	V	X	L	R	D	G	A	X	A	A	G	C	L	F	D	.	.	.	.	P	E	L	V	S	E	T	F	L	H	G	V	E	G	V	L	R
Template Known Secondary structure														T	T	T	S		.	.	.	.
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions