Job Description P0C093 Confidence 99.84% Date Thu Jan 5 11:29:51 GMT 2012 Rank 77 Aligned Residues 170 % Identity 15% Template c3colB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of putative transcription regulator from2 lactobacillus plantarum Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	.	.	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R	L
Query Conservation																																																														.	.
Alig confidence										.																																																				.	.
Template Conservation										.
Template Sequence		K	Q	V	K	I	Q	D	A	.	V	A	A	I	I	L	A	E	G	P	A	G	V	S	T	T	K	V	A	K	R	V	G	I	A	Q	S	N	V	Y	L	Y	F	K	N	K	Q	A	L	I	D	S	V	Y	A	R	E	T	N	R	I	L	S	T	T	D	L	D	R	L	S	D	S	T	I	D	V	T	T	R	I
Template Known Secondary structure										.										G	G	G											T	S							T	T			S																	S									T		T	T	S
Template Predicted Secondary structure										.
Template SS confidence
		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	Y	V	Q	Q	V	Y	D	Y	S	L	A	N	P	D	S	L	T	I	I	Q	Q	I	K	A	L	N	P	N	N	I	V	A	N	L	L	T	A	A	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	V	I	K	Q	L	P	V	S	L	H	X	G	V	V	F	S	T	I	H	T
Template Known Secondary structure															S	T	T																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	B		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L	Q
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		H	T	T	N	I	S	K	G	R	Y	A	Q	D	.	Q	Y	T	F	G	D	I	F	Q	X	I	W	D	A	X	K
Template Known Secondary structure								T	T	S	S		T	T	.	S	S														B
Template Predicted Secondary structure															.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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