Job Description P0C093 Confidence 99.80% Date Thu Jan 5 11:29:51 GMT 2012 Rank 96 Aligned Residues 179 % Identity 16% Template c3cdlA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000 Resolution 2.36 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R
Query Conservation
Alig confidence													.																																																						.	.	.	.
Template Conservation													.																																																						.	.	.	.
Template Sequence		T	D	Q	K	R	E	S	I	V	Q	A	.	A	I	A	E	F	G	D	R	G	F	E	I	T	S	X	D	R	I	A	A	R	A	E	V	S	K	R	T	V	Y	N	H	F	P	S	K	E	E	L	F	A	E	X	L	Q	R	L	W	N	C	A	E	V	.	.	.	.	V	Y	R	P	L	V	S	L	R	E	Q
Template Known Secondary structure													.										T	T	T										T	T	S							T	T	S	S	S															T				.	.	.	.	S			T	T	S
Template Predicted Secondary structure													.																																																						.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E
Query Conservation
Alig confidence																																						.	.	.	.	.	.																								.
Template Conservation																																						.	.	.	.	.	.																								.
Template Sequence		L	L	E	L	L	W	G	K	X	R	N	L	T	D	S	S	F	L	D	L	A	R	V	V	V	G	A	T	I	H	S	P	E	R	A	Q	.	.	.	.	.	.	V	W	L	E	E	T	F	S	A	W	I	R	A	A	Q	K	D	G	R	L	K	P	V	.	D	P	G	F	A	A	T	Q	X	H	A	L	L	K
Template Known Secondary structure														T																	S						T	.	.	.	.	.	.	T																T	T		B		S		.
Template Predicted Secondary structure																																						.	.	.	.	.	.																								.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.
		168	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		G	M	L	S	R	F	.	.	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L	Q
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		S	F	A	F	W	P	Q	V	T	F	N	A	A	L	L	T	P	Q	E	Q	S	N	V	V	E	S	A	L	N	X	F	L	G
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions