Job Description P0C093 Confidence 99.87% Date Thu Jan 5 11:29:51 GMT 2012 Rank 42 Aligned Residues 192 % Identity 15% Template c3bhqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a putative tetr-family transcriptional regulator2 (mlr_4833) from mesorhizobium loti maff303099 at 1.54 a resolution Resolution 1.54 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	.	.	.	L	K	D	E
Query Conservation																																																																											.	.	.
Alig confidence																.																																																											.	.	.
Template Conservation																.
Template Sequence		E	T	R	S	A	R	K	D	R	E	I	I	Q	A	.	A	T	A	A	F	I	S	K	G	Y	D	G	T	S	X	E	E	I	A	T	K	A	G	A	S	K	Q	T	V	Y	K	H	F	T	D	K	E	T	L	F	G	E	V	V	L	S	T	A	S	Q	V	N	D	I	I	E	S	V	T	T	L	L	S	E	A
Template Known Secondary structure																.										S	T	T											T	S										S	S																													T
Template Predicted Secondary structure																.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		K	D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	.	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		I	F	X	E	G	G	L	Q	Q	L	A	R	R	L	I	A	V	L	X	D	E	E	L	L	K	L	R	R	L	I	I	A	N	A	D	R	X	P	Q	L	G	R	A	W	Y	E	K	G	F	E	R	X	L	A	S	T	A	S	C	F	Q	K	L	T	N	R	G	L	I	Q	T	G	D	P	Y	L	A	A	S	H
Template Known Secondary structure		S																		T															T	T	T												T																		T	T	S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	A	F	C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	G	X	L	L	W	I	P	X	N	E	A	X	F	T	G	S	N	R	R	S	K	A	E	L	E	R	H	A	D	A	S	V	E	A	F
Template Known Secondary structure																		T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions