Job Description P0C093 Confidence 99.83% Date Thu Jan 5 11:29:51 GMT 2012 Rank 81 Aligned Residues 156 % Identity 12% Template c3aqsD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:bacterial regulatory proteins, tetr family; PDBTitle: crystal structure of rolr (ncgl1110) without ligand Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R	L	R	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		T	R	A	R	L	I	T	S	.	A	R	T	L	M	A	E	R	G	V	D	N	V	G	I	A	E	I	T	E	G	A	N	I	G	T	G	T	F	Y	N	Y	F	P	D	R	E	Q	L	L	Q	A	V	A	E	D	A	F	E	S	V	G	I	A	L	D	Q	V	L	T	K	L	D	D	P	A	E	V	F	A	G
Template Known Secondary structure										.							T	T		T	T											T	T	S		T	G	G	G	G	G	T		S	S																					T	T	T	G	G	G	S	S
Template Predicted Secondary structure										.
Template SS confidence
		31	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G	M	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																											.
Template Conservation																													.	.	.	.	.	.	.	.	.																											.
Template Sequence		S	L	R	H	L	V	R	H	S	L	E	D	R	I	W	G	G	F	F	I	Q	M	G	A	A	H	P	.	.	.	.	.	.	.	.	.	V	L	M	R	I	L	G	P	R	A	R	R	D	L	L	H	G	L	E	T	G	R	F	T	I	E	.	D	L	D	L	A	T	T	C	T	F	G	S	L	I	A	A	I
Template Known Secondary structure																					T	T		T	T				.	.	.	.	.	.	.	.	.																					T	S	B			S	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	V	R	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	A	L	S	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions