Job Description P0C093 Confidence 99.86% Date Thu Jan 5 11:29:51 GMT 2012 Rank 53 Aligned Residues 187 % Identity 12% Template c2raeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	K	Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D
Query Conservation
Alig confidence							.	.	.											.																																																													.
Template Conservation							.	.	.											.																																																													.
Template Sequence		I	G	R	R	P	.	.	.	S	T	T	Q	D	R	I	S	T	V	.	G	I	E	L	F	T	E	Q	G	F	D	A	T	S	V	D	E	V	A	E	A	S	G	I	A	R	R	T	L	F	R	Y	F	P	S	K	N	A	I	P	W	G	D	F	D	A	H	L	A	E	M	R	A	Q	L	A	A	Q	P	D	.
Template Known Secondary structure					S		.	.	.											.										T	T	T	S									T	T	S										S	S	T	T	T	G	G	G		S															S		T	.
Template Predicted Secondary structure							.	.	.											.																																																													.
Template SS confidence
		11	.	.	.	.				.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S
Query Conservation
Alig confidence																																					.	.																												.	.
Template Conservation																																					.	.																												.	.
Template Sequence		D	I	P	I	V	D	G	L	T	A	A	L	L	Q	F	N	A	F	P	A	S	E	E	I	N	H	R	K	R	M	G	L	I	L	R	.	.	V	P	A	L	Q	A	Y	S	V	V	M	Y	E	G	W	R	N	V	I	A	E	Y	V	A	S	R	L	.	.	G	T	S	P	T	D	H	V	P	R	T	V	G	Y
Template Known Secondary structure		T	S													T	T				G	G	G														.	.	S																											.	.	T	S		T	T	S
Template Predicted Secondary structure																																					.	.																												.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	A	F	C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		L	L	L	G	V	A	M	S	A	Y	E	Q	W	L	D	D	D	S	L	.	E	L	N	E	L	L	A	S	G	M	Q	S	L	Y	D	G	L
Template Known Secondary structure																		T	T	S	.																	S
Template Predicted Secondary structure																					.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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