Job Description P0C093 Confidence 99.81% Date Thu Jan 5 11:29:51 GMT 2012 Rank 90 Aligned Residues 193 % Identity 12% Template c2qcoA_ PDB info PDB header:transcription Chain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		E	K	Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	.	.	D
Query Conservation																																																																															.	.
Alig confidence																		.																																																													.	.
Template Conservation																		.
Template Sequence		T	P	S	Q	K	V	L	A	R	Q	E	K	I	K	A	V	.	A	L	E	L	F	L	T	K	G	Y	Q	E	T	S	L	S	D	I	I	K	L	S	G	G	S	Y	S	N	I	Y	D	G	F	K	S	K	E	G	L	F	F	E	I	L	D	D	I	C	K	K	H	F	H	L	I	Y	S	K	T	Q	E	I	K
Template Known Secondary structure																		.								T	T	T	T	T												T	T		T	T		S	S	S	T	T	S																										T	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		E	K	D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	.	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A
Query Conservation																														.
Alig confidence																														.																																												.	.
Template Conservation																																																																										.	.
Template Sequence		N	G	T	L	K	E	I	L	T	S	F	G	L	A	F	I	E	I	F	N	Q	P	E	A	V	A	F	G	K	I	I	Y	S	Q	V	Y	D	K	D	R	H	L	A	N	W	I	E	N	N	Q	Q	N	F	S	Y	N	I	L	M	G	F	F	K	Q	Q	N	N	S	Y	M	K	K	.	.	N	A	E	K	L	A
Template Known Secondary structure		T	S																		T	S													G	G	G		S	S										S	T	T	S	S	T										S	S	S							.	.	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		S	Q	I	L	A	F	C	E	G	M	L	S	R	F	V	R	.	.	.	.	.	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L	Q
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		V	L	F	C	T	M	L	K	E	P	Y	H	H	L	N	V	L	I	N	A	P	L	K	N	K	K	E	Q	K	E	H	V	E	F	V	V	N	V	F	L	N	G	I	N
Template Known Secondary structure										T	T																															T		S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions