Job Description P0C093 Confidence 99.75% Date Thu Jan 5 11:29:51 GMT 2012 Rank 106 Aligned Residues 169 % Identity 16% Template c2pz9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative regulatory protein; PDBTitle: crystal structure of putative transcriptional regulator sco4942 from2 streptomyces coelicolor Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R	L	R	L
Query Conservation
Alig confidence										.																																																								.	.	.	.	.	.	.
Template Conservation										.																																																								.	.	.	.	.	.	.
Template Sequence		T	R	Q	R	I	V	A	A	.	A	K	E	E	F	A	R	H	G	I	A	G	A	R	V	D	R	I	A	K	Q	A	R	T	S	K	E	R	V	Y	A	Y	F	R	S	K	E	A	L	Y	A	H	V	A	E	R	E	T	T	A	L	I	E	A	T	.	.	.	.	.	.	.	Q	L	D	P	A	D	L	P	G
Template Known Secondary structure										.																						T	T	S										S	S																				T	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure										.																																																								.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G	M	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	G	I	L	F	D	H	F	A	A	R	P	D	H	Y	R	L	I	T	W	G	R	L	E	L	A	P	.	.	.	.	.	.	.	.	.	.	L	Q	A	T	I	A	G	K	L	D	K	L	R	D	A	Q	R	I	G	L	L	D	P	A	W	D	P	V	D	V	L	A	L	I	N	Q	I	A	X	T	W	A
Template Known Secondary structure																											T			.	.	.	.	.	.	.	.	.	.																		T	T	S	S		T	T	S														T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		171							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		S	.	.	.	.	.	.	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	P	E	I	A	A	A	A	A	D	Q	A	V	D	P	S	V	T	A	R	R	A	A	L	V	T	A	V	E	H	X	F
Template Known Secondary structure														S	S	S																		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions