Job Description P0C093 Confidence 99.84% Date Thu Jan 5 11:29:51 GMT 2012 Rank 78 Aligned Residues 191 % Identity 16% Template c2oi8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative regulatory protein sco4313; PDBTitle: crystal structure of putative regulatory protein sco4313 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		T	P	R	E	R	Y	R	T	Q	V	R	A	E	I	K	D	H	.	A	W	E	Q	I	A	T	A	G	A	S	A	L	S	L	N	A	I	A	K	R	X	G	X	S	G	P	A	L	Y	R	Y	F	D	G	R	D	E	L	I	T	E	L	I	R	D	A	Y	R	S	Q	A	D	S	L	R	A	A	A	A	S	G
Template Known Secondary structure				S	S														.										T	T	S										T	T								T	T		S	S																										T	T
Template Predicted Secondary structure																			.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	.	.	.	.	.	.	.	.	.	.	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		A	D	.	.	.	.	L	A	G	L	A	H	A	L	R	A	W	A	L	D	D	P	Q	R	Y	F	L	I	F	G	T	P	V	P	G	Y	R	A	P	D	D	I	T	E	I	A	A	E	T	X	A	V	I	V	D	A	C	A	A	G	T	D	G	A	F	D	A	H	L	D	T	H	R	Q	W	A	D	R	P	A
Template Known Secondary structure				.	.	.	.																								S	S			T	T					G	G	G	T	T	T	T																	S									S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		87	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	S	A	L	H	R	A	L	S	F	W	S	R	L	H	G	V	L	S	L	E	L	A	G	Q	F	T	G	X	G	F	D	S	A	L	L	F	E	A	E	L	K	D	L	L
Template Known Secondary structure																									T	T	T	T	T	T	S		S														S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions