Job Description P0C093 Confidence 64.73% Date Thu Jan 5 11:29:51 GMT 2012 Rank 332 Aligned Residues 35 % Identity 14% Template c2k9lA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		Q	E	L	A	L	E	.	L	L	N	Y	L	N	E	K	G	F	L	S	K	S	V	E	E	I	S	D	V	L	R	C	S	V	E	E	L
Template Known Secondary structure								.						T	T	S	S	T	T												T	S
Template Predicted Secondary structure								.
Template SS confidence
		90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions