Job Description P0C093 Confidence 99.85% Date Thu Jan 5 11:29:51 GMT 2012 Rank 65 Aligned Residues 177 % Identity 14% Template c2i10A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr transcriptional regulator; PDBTitle: putative tetr transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T	A	R	L	R	L	I
Query Conservation
Alig confidence									.																																																															.
Template Conservation									.																																																															.
Template Sequence		D	Q	V	A	L	Q	T	.	A	X	E	L	F	W	R	Q	G	Y	E	G	T	S	I	T	D	L	T	K	A	L	G	I	N	P	P	S	L	Y	A	A	F	G	S	K	R	D	L	F	E	K	T	L	D	R	Y	X	C	E	R	T	L	Q	L	E	E	A	X	V	R	P	.	T	A	H	E	A	V	L	D	F
Template Known Secondary structure									.									T	T	T	T											T												S														S											T	S	S	.	S
Template Predicted Secondary structure									.																																																															.
Template SS confidence
		11	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C	E	G	M	L	S
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		L	T	G	R	V	E	V	F	T	G	C	X	T	V	Q	.	.	.	A	G	L	A	S	G	E	P	H	H	E	I	V	D	L	L	T	A	A	R	E	Q	X	R	Q	T	V	L	D	R	F	E	K	A	L	A	D	G	D	L	P	A	G	T	D	C	T	A	L	A	R	Y	V	X	A	A	V	Y	G	L	S	V
Template Known Secondary structure															S	S	.	.	.		B	T	T	T	B																																T	S	S		T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	A	S	G	A	P	R	E	E	L	T	A	A	A	I	L	A	A	Q	V	V
Template Known Secondary structure					T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions