Job Description P0C093 Confidence 99.87% Date Thu Jan 5 11:29:51 GMT 2012 Rank 40 Aligned Residues 188 % Identity 17% Template c2hytA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (eca1819)2 from pectobacterium atrosepticum at 1.64 a resolution Resolution 1.64 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		R	T	R	A	E	X	E	E	T	R	A	T	L	L	A	T	.	A	R	K	V	F	S	E	R	G	Y	A	D	T	S	X	D	D	L	T	A	Q	A	S	L	T	R	G	A	L	Y	H	H	F	G	D	K	K	G	L	L	A	A	V	V	E	Q	I	D	A	E	X	D	E	R	L	Q	A	I	S	D	T	A	E
Template Known Secondary structure																		.										T	T	T											T			T	T							S	S																												S
Template Predicted Secondary structure																		.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I
Query Conservation
Alig confidence																																			.	.	.	.	.																															.
Template Conservation																																			.	.	.	.	.																															.
Template Sequence		D	D	W	E	G	F	R	C	R	C	R	A	Y	L	E	X	A	L	E	P	E	I	Q	R	I	V	L	R	D	A	R	A	V	.	.	.	.	.	L	G	G	A	S	P	D	S	Q	R	H	C	V	E	S	X	Q	R	L	I	D	N	L	I	R	Q	G	V	V	A	.	E	A	D	P	Q	A	L	A	S	L	I
Template Known Secondary structure		S															G	G	G	S							T	T	T						.	.	.	.	.			S	S																						T	T	S	B		.	S
Template Predicted Secondary structure																																			.	.	.	.	.																															.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	C	E	G	M	L	S	R	F	V	R	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	S	L	A	E	A	A	F	W	I	A	E	G	E	D	G	N	A	R	L	A	Q	G	V	A	A	L	E	L	L	L	R	G	L
Template Known Secondary structure																S																			T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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