Job Description P0C093 Confidence 99.73% Date Thu Jan 5 11:29:51 GMT 2012 Rank 111 Aligned Residues 173 % Identity 20% Template c2guhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of the putative tetr-family transcriptional2 regulator from rhodococcus sp. rha1 Resolution 1.52 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	K	D	T	T
Query Conservation
Alig confidence															.																																																			.	.	.	.	.	.	.
Template Conservation															.																																																			.	.	.	.	.	.	.
Template Sequence		R	T	A	E	Q	S	R	S	L	I	V	D	A	.	A	G	R	A	F	A	T	R	P	Y	R	E	I	T	L	K	D	I	A	E	D	A	G	V	S	A	P	L	I	I	K	Y	F	G	S	K	E	Q	L	F	D	A	L	V	D	F	R	A	A	A	.	.	.	.	.	.	.	E	I	V	F	S	G	P	L	D
Template Known Secondary structure															.								S		G	G	G											T	S										S	S									T							.	.	.	.	.	.	.				T		S		S	T
Template Predicted Secondary structure															.																																																			.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F
Query Conservation
Alig confidence																																		.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		G	L	G	E	R	X	V	S	X	F	A	R	P	L	E	P	Y	K	P	L	S	L	N	I	L	F	X	S	G	P	S	E	.	.	.	.	.	E	S	S	R	K	L	R	A	N	Y	S	A	Q	X	I	D	A	L	A	E	R	.	.	.	.	.	.	L	P	G	R	D	A	R	L	R	A	E	L	V	X	S	X
Template Known Secondary structure		T										T	S				T	T		S								T	T		T	T		.	.	.	.	.														T								.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																		.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		166	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		C	E	G	M	L	S	R	F	V	R	.	.	.	S	E	F	K	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		L	T	G	L	A	V	X	R	R	K	X	X	Q	E	H	A	T	G	T	P	E	E	V	V	A	H	Y	A	P	L	V	Q	E	L	L
Template Known Secondary structure											T	T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions