Job Description P0C093 Confidence 99.90% Date Thu Jan 5 11:29:51 GMT 2012 Rank 25 Aligned Residues 186 % Identity 17% Template c1u9nA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional repressor ethr; PDBTitle: crystal structure of the transcriptional regulator ethr in2 a ligand bound conformation opens therapeutic perspectives3 against tuberculosis and leprosy Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		R	N	R	R	E	E	I	L	Q	S	L	A	L	M	L	E	S	S	D	G	S	Q	R	I	T	T	A	K	L	A	A	S	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	D	S	L	I	E	F	I	E	D	S	L	I	T	R	I	N	L	I	L	K	D	E	.	.	K	D	T	T	A
Query Conservation																																																																											.	.
Alig confidence												.																																																															.	.
Template Conservation												.
Template Sequence		D	D	R	E	L	A	I	L	A	T	.	A	E	N	L	L	E	D	R	P	L	A	D	I	S	V	D	D	L	A	K	G	A	G	I	S	R	P	T	F	Y	F	Y	F	P	S	K	E	A	V	L	L	T	L	L	D	R	V	V	N	Q	A	D	X	A	L	Q	T	L	A	E	N	P	A	D	T	D	R	E	N
Template Known Secondary structure												.					T	T	T	S		G	G	G											T	S						T	T	T		S																											S			S	S
Template Predicted Secondary structure												.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	L	I	V	L	L	L	L	G	F	G	E	R	N	P	G	L	T	R	I	L	T	G	H	A	L	M	F	E	Q	D	R	L	Q	G	R	I	N	Q	L	F	E	R	I	E	A	Q	L	R	Q	V	L	R	E	K	R	M	R	E	G	E	G	Y	T	T	D	E	T	L	L	A	S	Q	I	L	A	F	C
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		X	W	R	T	G	I	N	V	F	F	E	T	F	G	S	H	K	A	V	T	R	A	G	Q	A	A	.	.	R	A	T	S	V	E	V	A	E	L	W	S	T	F	X	Q	K	W	I	A	Y	T	A	A	V	I	D	A	E	R	D	R	G	A	A	P	R	T	L	P	A	H	E	L	A	T	A	L	N	L	X	N
Template Known Secondary structure																T												.	.	T	T	T																													T	T	S	S				S
Template Predicted Secondary structure																												.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		E	G	M	L	S	R	F	V	R	S	E	F	K	.	Y	R	P	T	D	D	F	D	A	R	W	P	L	I	A	A	Q	L
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		E	R	T	L	F	A	S	F	A	G	E	Q	P	S	V	P	E	A	R	V	L	D	T	L	V	H	I	W	V	T	S	I
Template Known Secondary structure											T		S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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