Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 11 Aligned Residues 177 % Identity 18% Template d2frea1 SCOP info FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like NADH oxidase/flavin reductase Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		T	P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	T	.	.	.	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		Y	P	V	D	P	L	F	L	D	R	W	S	P	R	A	F	D	G	S	P	X	P	K	E	H	L	L	T	I	L	D	A	A	H	W	A	P	S	A	S	N	H	Q	P	W	R	F	V	Y	A	H	K	D	S	E	D	W	P	L	F	V	E	L	L	X	E	G	N	Q	K	W	A	K	N	A	S	V	L	L	F
Template Known Secondary structure		S				T											B																			T				G	G	G											T	T	S	T	T							T	B									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	E	A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L	F	G	L	C	L	G
Query Conservation
Alig confidence																					.	.	.	.	.	.																														.	.
Template Conservation																					.	.	.	.	.	.																														.	.
Template Sequence		V	I	S	R	D	H	T	I	S	H	E	G	E	K	K	P	S	A	T	.	.	.	.	.	.	H	S	F	D	A	G	A	A	W	F	S	L	A	X	Q	A	H	L	L	G	Y	H	A	H	G	X	G	G	I	.	.	F	K	D	R	I	V	E	K	L	D	I	P	D	G	F	K	V	E	A	G	V	A	I	G
Template Known Secondary structure						S					T	T							S	S	.	.	.	.	.	.																			T	T									B	.	.									T	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.																														.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	A	D	N	P	D	L	.	.	.	.	.	.	.	.	.	.	K	P	R	L	P	A	S	I	L	V	H	E	N	S	Y	Q	P	L	D	K
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	T	D	K	S	I	L	P	D	D	L	A	E	R	E	V	P	S	K	R	V	P	L	A	D	V	A	F	E	G	R	F	T	G	K	A	D
Template Known Secondary structure			B			G	G	G	S							T		S							G	G	G	T			S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions