Return to main results Retrieve Phyre Job Id

Job DescriptionP17117
Confidence100.00%DateThu Jan 5 11:36:00 GMT 2012
Rank2Aligned Residues240
% Identity38%Templated1zcha1
SCOP infoFMN-dependent nitroreductase-like FMN-dependent nitroreductase-like NADH oxidase/flavin reductase
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFC
Query Conservation 

  

 
  




 
   

  
 
  

 

  


  
 
    


 
      
            
   

  
Alig confidence 















































































Template Conservation 

  

 
  




 
   

  
 
  

 

  



 
 
    


 
      
      
  
  
       
Template Sequence  MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAGGQPWIDQAPVFLLFC
Template Known Secondary structure 

T





B
S



S

GGG




TT

SS
Template Predicted Secondary structure 






























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.... .....100.........110.........120.........130.........140.........150....
Predicted Secondary structure 



......


















Query SS confidence 













. . . . . .



























































Query Sequence  ADFNRHLQICPDAQ. . . . . . LGLAEQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFG
Query Conservation   
  
         ......         
  







  


 






 

        
 


 

    

  
Alig confidence 













......



























































Template Conservation   
  
                           








 


 






 

        
 


 

    

 
Template Sequence  ADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVFPLSG
Template Known Secondary structure 





GGGSTT
GGGGSSTT

TT
Template Predicted Secondary structure 























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   155....160.........170.........180..... ....190.........200.........210.........220.........230..
Predicted Secondary structure 





















..












Query SS confidence 






























. .














































Query Sequence  LCLGWPADNPDLKPRLPASILVHENSYQPLD. . KGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYL
Query Conservation 
 



      




   
     
    ..   
  

                  
                   
Alig confidence 






























..














































Template Conservation 
 



 
    




   
     
            

                  
                   
Template Sequence  LVIGHPADRSAKKPRLPQEAVNHQETYLNQDELTSHIQAYDEQMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREML
Template Known Secondary structure 
BS









S
SSS


TTS



TS
S
TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   233......240
Predicted Secondary structure 





Query SS confidence 







Query Sequence  HKQGWATR
Query Conservation    


   
Alig confidence 







Template Conservation     

   
Template Sequence  EKQGFKVE
Template Known Secondary structure  TT



Template Predicted Secondary structure 




Template SS confidence 







   241.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions