Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 4 Aligned Residues 237 % Identity 42% Template c3n2sD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase; PDBTitle: structure of nfra1 nitroreductase from b. subtilis Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	T	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	I	E	T	I	L	N	H	R	S	I	R	S	F	T	D	Q	L	L	T	A	E	E	I	D	T	L	V	K	S	A	Q	A	A	S	T	S	S	Y	V	Q	A	Y	S	I	I	G	V	S	D	P	E	K	K	R	E	L	S	V	L	A	G	N	Q	P	Y	V	E	K	N	G	H	F	F	V	F	C	A	D
Template Known Secondary structure									T							B		S																	T	S			G	G	G																						T	T	S		G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		F	N	R	H	L	Q	I	C	P	D	A	Q	.	.	.	.	.	.	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	E	A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L	F	G	L	C
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	R	H	Q	Q	L	A	E	E	K	G	E	H	I	S	E	L	L	E	N	T	E	X	F	X	V	S	L	I	D	A	A	L	A	A	Q	N	X	S	I	A	A	E	S	X	G	L	G	I	C	Y	I	G	G	I	R	N	E	L	D	K	V	T	E	V	L	Q	T	P	D	H	V	L	P	L	F	G	L	A
Template Known Secondary structure													T				T	T	G	G	G	S																									T	T							G	G	G	G	G	G									T			T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		L	G	W	P	A	D	N	P	D	L	K	P	R	L	P	A	S	I	L	V	H	E	N	S	Y	Q	P	L	D	.	.	.	K	G	A	L	A	Q	Y	D	E	Q	L	A	E	Y	Y	L	T	R	G	S	N	N	R	R	D	T	W	S	D	H	I	R	R	T	I	I	K	E	S	R	P	F	I	L	D	Y	L	H
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		V	G	H	P	A	N	L	S	G	K	K	P	R	L	P	K	Q	A	V	Y	H	E	N	T	Y	N	V	N	T	D	D	F	R	H	T	X	N	T	Y	D	K	T	I	S	D	Y	Y	R	E	R	T	N	G	K	R	E	E	T	W	S	D	Q	I	L	N	F	X	K	Q	K	P	R	T	Y	L	N	D	Y	V	K
Template Known Secondary structure					B	S																	S	S	S																											T	T	T																S				T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		234	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	G	W	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	G	F	N	K
Template Known Secondary structure			T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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