Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 6 Aligned Residues 164 % Identity 24% Template c3kwkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase; PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (np_809094.1) from bacteroides thetaiotaomicron vpi-3 5482 at 1.54 a resolution Resolution 1.54 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	T	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	A	L	D	N	I	F	E	R	K	S	V	R	T	Y	L	N	K	G	V	E	K	E	K	I	D	L	X	L	R	A	G	X	S	A	P	S	G	K	D	V	R	P	W	E	F	V	V	V	S	D	R	A	K	L	D	S	X	A	A	A	L	P	Y	A	K	X	L	T	Q	A	R	N	A	I	I	V	C	G
Template Known Secondary structure													B				B		S																T	T	S			G	G	G																							T	T		G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	.	.	E	A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L	F	G	L	C	L	G	W
Query Conservation																																																									.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	A	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	W	Y	L	D	C	S	A	A	A	Q	N	I	L	L	A	A	E	S	X	G	L	G	A	V	W	T	A	A	Y	P	Y	E	D	R	X	E	V	V	R	K	Y	T	H	L	P	E	N	I	L	P	L	C	V	I	P	F	G	Y
Template Known Secondary structure			T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																			T	T									T	T													T			T	T											S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.																.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	N	P	D	L	K	P	R	L	P	A	S	I	L	V	H	E	N	S	Y
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		P	A	T	K	E	Q	P	K	Q	K	Y	D	.	E	K	K	I	H	Y	N	Q	Y
Template Known Secondary structure		B	S	S										.	G	G	G			S	S
Template Predicted Secondary structure														.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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