Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 34 Aligned Residues 167 % Identity 14% Template c3k6hB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitroreductase family protein; PDBTitle: crystal structure of a nitroreductase family protein from2 agrobacterium tumefaciens str. c58 Resolution 3.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																	.	.	.
Predicted Secondary structure															.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	T	I	E	L	I	C	G	H	R	S	I	.	.	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L
Query Conservation															.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	L	L	D	Y	L	R	V	R	R	S	T	P	A	L	Q	L	S	E	P	G	P	S	K	G	E	I	E	E	I	L	R	L	A	V	R	V	P	D	H	G	K	L	A	P	W	R	F	V	V	Y	R	G	E	E	R	V	R	L	S	E	A	A	L	R	I	A	L	E	K	N	P	D	L	D	L	Q	Q	Q
Template Known Secondary structure																G	G	G		B	S																T					G	G	G																														S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	E	A	V	T	K	L	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	E	R	T	R	F	T	R	A	P	V	V	I	A	V	I	S	T	A	K	.	.	.	.	.	.	.	.	.	.	P	H	F	K	I	P	E	W	E	Q	V	X	S	A	G	A	V	C	L	N	V	I	F	A	A	N	A	S	G	F	A	A	N	W	L	T	E	W	L	A	F	D	P	A	F	L	A	E	I
Template Known Secondary structure					T	T	T	T	S	S	S	S											.	.	.	.	.	.	.	.	.	.			S	S	S																						T	T	T									G	G	G	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	Q	H	V	L	P	L	F	G	L	C	L	G	W	P	A	D	N	P	D	L	K	P	R	L	P	A	S	I	L	V	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	S	A	E	E	K	V	A	G	Y	I	H	I	G	S	T	T	F	P	P	V	E	R	P	R	P	E	L	A	D	V	V	T	W
Template Known Secondary structure		T			S	S											B		S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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