Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 42 Aligned Residues 151 % Identity 20% Template c3hoiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fmn-dependent nitroreductase bf3017; PDBTitle: crystal structure of fmn-dependent nitroreductase bf3017 from2 bacteroides fragilis nctc 9343 (yp_212631.1) from bacteroides3 fragilis nctc 9343 at 1.55 a resolution Resolution 1.55 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.											.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	.	.	.	.	.	.	.	.	.	.	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	X	K	A	L	S	E	R	H	S	T	R	E	Y	A	S	K	A	L	S	N	T	D	L	S	D	L	L	W	A	A	N	G	I	N	R	S	S	E	G	K	R	T	A	P	S	A	X	N	R	Q	D	I	D	I	Y	V	V	L	P	Q	G	T	Y	L	Y	D	A	K	G	H	K	L	N	L	I	S	E	G
Template Known Secondary structure																		S	S																				T	T	T	T			S	S			G	G	G											T	T							T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	V	T	L	T	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	E
Query Conservation		.	.
Alig confidence		.	.																																					.	.	.	.	.	.																																.	.
Template Conservation																																								.	.	.	.	.	.																																.	.
Template Sequence		D	H	R	S	A	V	A	G	G	Q	A	F	V	N	N	A	P	V	S	L	V	L	V	S	D	L	S	K	L	G	D	A	K	S	N	H	V	Q	.	.	.	.	.	.	L	X	G	A	X	D	A	G	I	V	S	Q	N	I	S	L	F	C	S	A	A	R	L	A	T	V	P	R	A	S	X	.	.	D	L	V
Template Known Secondary structure									T	T		G	G	G	G	G	S	S									G	G	G	T	S		T	T						.	.	.	.	.	.																						T						B				.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.																																.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L	F	G	L	C	L	G	W	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	A	A	L	K	L	K	D	T	Q	X	P	X	X	N	H	P	V	G	Y	F	K
Template Known Secondary structure								T			T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions