Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 38 Aligned Residues 169 % Identity 18% Template c3gh8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:iodotyrosine dehalogenase 1; PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound2 to fmn and di-iodotyrosine (dit) Resolution 2.61 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	Y	E	L	L	N	K	R	R	S	V	R	F	I	S	S	E	H	V	P	M	E	V	I	E	N	V	I	K	A	A	G	T	A	P	S	G	A	H	T	E	P	W	T	F	V	V	V	K	D	P	D	M	K	H	K	I	R	E	I	I	E	E	E	E	E	I	N	Y	M	K	R	M	G	K	R	W	V	T
Template Known Secondary structure								T	T					S		B																		T	T	S			G	G	G																																T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
									64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	G	G	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																			.	.	.	.	.	.																														.
Template Conservation																																											.	.	.	.	.	.																														.
Template Sequence		D	L	K	K	L	R	T	N	W	I	K	E	Y	L	D	T	A	P	V	L	I	L	I	F	K	Q	V	H	G	F	A	A	N	G	K	K	K	V	H	Y	Y	.	.	.	.	.	.	N	E	I	S	V	S	I	A	C	G	L	L	L	A	A	L	Q	N	A	G	L	V	T	V	T	T	T	P	L	.	N	C	G
Template Known Secondary structure				G	G	G				S			T					S	S									S	S				T	T							T	T	.	.	.	.	.	.																			T	T		B				B			T	.	T
Template Predicted Secondary structure																																											.	.	.	.	.	.																														.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		E	A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L	F	G	L	C	L	G	W	P	A	D	N	P	D	.	.	L	K	P	R	L	P	A	S	I	L	V	H	E
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		P	R	L	R	V	L	L	G	R	P	S	H	E	K	L	L	V	L	L	P	V	G	Y	P	S	R	D	A	T	V	P	D	L	K	R	K	A	L	D	Q	I	M	V	T
Template Known Secondary structure								T	T			T	T										B		B		T	T											G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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