Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 32 Aligned Residues 176 % Identity 16% Template c3eo8A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:blub-like flavoprotein; PDBTitle: crystal structure of blub-like flavoprotein (yp_001089088.1) from2 clostridium difficile 630 at 1.74 a resolution Resolution 1.74 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	Q	D	T	I	F	K	R	Q	S	V	R	K	F	K	N	Q	D	V	S	D	E	D	I	L	K	X	I	K	A	A	G	A	A	P	S	G	K	N	I	Q	N	W	H	F	V	V	I	K	R	R	D	L	X	E	K	I	A	D	V	I	T	K	K	Q	Q	E	I	L	V	E	X	D	K	V	S	V	D	K
Template Known Secondary structure												B				B		S																	T	S			G	G	G																																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
													67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Q	K	H	V	A	Q	A	A	E	F	W	V	F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	.	.	.	.	.	.	.	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	R	F	R	K	F	V	K	N	F	T	L	F	Y	L	K	A	P	V	L	V	L	V	F	T	K	V	Y	N	P	S	G	Y	Y	E	L	E	L	I	D	A	P	K	E	T	I	D	K	L	F	I	R	N	P	G	X	Q	S	L	G	A	A	I	E	N	F	T	L	S	A	I	E	L	G	Y	G	S	C	W
Template Known Secondary structure													T	G	G	G	G	G	S	S													T	T							T	T											T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		I	G	G	L	R	N	N	I	E	A	V	T	K	L	L	K	L	P	.	.	.	.	.	Q	H	V	L	P	L	F	G	L	C	L	G	W	P	A	D	N	P	D	L	K	P	R	L	P	A	S	I	L	V	H	E
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		L	T	S	Q	N	Y	A	A	D	E	I	E	A	V	L	E	A	E	T	G	F	E	K	G	E	Y	F	L	G	A	X	L	A	L	G	V	P	E	D	N	L	K	S	P	S	K	K	P	V	E	E	I	C	T	F
Template Known Secondary structure				T	T	G	G	G																	T	T												B		S	S									G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions