Job Description P17117 Confidence 100.00% Date Thu Jan 5 11:36:00 GMT 2012 Rank 21 Aligned Residues 174 % Identity 17% Template c2wqfA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:copper induced nitroreductase d; PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.											70	.	.
Predicted Secondary structure																										.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	E	L	I	C	G	H	R	S	I	R	H	F	T	D	E	P	I	S	E	A	Q	R	.	E	A	I	I	N	S	A	R	A	T	S	S	S	S	F	L	Q	C	S	S	I	I	R	I	T	D	K	A	L	R	E	E	L	V	T	L	T	G	G	Q	K	H	.	.	.	.	.	.	.	.	.	.	V	A	Q
Query Conservation																										.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	K	S	L	E	N	R	R	T	I	Y	A	L	G	R	N	V	Q	D	E	E	K	V	I	E	T	I	K	E	A	V	R	F	S	P	T	A	F	N	S	Q	T	G	R	L	L	I	L	T	G	D	A	Q	D	K	L	W	D	E	I	V	A	P	E	L	K	A	A	M	E	A	A	K	L	D	G	F	K	A
Template Known Secondary structure											B									S															T	S			G	G	G																					T																			T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	F	W	V	F	C	A	D	F	N	R	H	L	Q	I	C	P	D	A	Q	L	G	L	A	E	Q	L	L	L	G	V	V	D	T	A	M	M	A	Q	N	A	L	I	A	A	E	S	L	G	L	G	G	V	Y	I	G	G	L	R	N	N	I	E	A	V	T	K	L	L	K	L	P	Q	H	V	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	G	T	I	L	F	F	E	D	Q	A	V	V	K	N	L	Q	E	Q	F	A	L	Y	A	D	N	F	P	V	W	S	E	Q	G	S	G	I	I	S	V	N	V	W	T	A	L	A	E	L	G	L	G	A	N	L	Q	H	Y	N	P	L	I	D	E	A	V	A	K	E	W	N	L	P	E	S	W	K	L	R
Template Known Secondary structure		S	S																			T	G	G	G	T	T																								T	T									T	T	T	T								T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	C	L	G	W	P	A	D	N	P	D	L	K	P	R	L	P	A	S	I	L	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	L	V	F	G	S	I	E	A	P	A	G	E	K	T	F	M	D	D	A	D	R	F	I
Template Known Secondary structure											S										G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions