Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8I1
Confidence39.41%DateThu Jan 5 11:07:53 GMT 2012
Rank116Aligned Residues95
% Identity16%Templated2qi2a2
SCOP infoRibonuclease H-like motif Translational machinery components ERF1/Dom34 middle domain-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30...... ...40.........50.........60.........70.........80..
Predicted Secondary structure 









..
















Query SS confidence 































. .













































Query Sequence  LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ. . DGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANR
Query Conservation 




 
  





 
     
 

  
   ..        
   
    
  





    
        
  
   
Alig confidence 































..























.....





......




Template Conservation 




  

 
  

  


    
 
   

      

  
          


 
.....


 

...... 
  
Template Sequence  AVAMDEDEAQIFLIHPYGIQQVGTVYSGRSGKYYSEASYFDQIVNALKNYSNSIIILG. . . . . PGFARD. . . . . . RFARY
Template Known Secondary structure 
SS
SS





T

S
.....SSS......
Template Predicted Secondary structure 

















.....



......
Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.. ...... .200...
 
   83......90.........100.........110
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  IHGRFGVEVKLHDERLSTVEARSGLFEQ
Query Conservation 
     
 
 
 


 

  
   
   
Alig confidence 



























Template Conservation 
      

   


 

  

 
 
 
Template Sequence  CAQRGVNVIGSFPANRTDSGAVYEFITS
Template Known Secondary structure  TS


S


SSSSS
Template Predicted Secondary structure 







Template SS confidence 



























   208.210.........220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions