|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | L | A | F | D | F | G | T | K | S | I | G | V | A | V | G | Q | R | I | T | G | T | A | R | P | L | P | A | I | K | A | Q | D | G | T | P | D | W | N | I | I | E | R | L | L | K | E | W | Q | P | D | E | I | I | V | G | L | P | L | N | M | D | G | T | E | Q | P | L | T | A | R | A | R | K | F | A | N | R | I |
Query Conservation |   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
R | V | G | A | L | D | V | G | E | A | R | I | G | L | A | V | G | E | E | G | V | P | L | A | S | G | R | G | Y | L | V | R | K | T | L | E | E | D | V | E | A | L | L | D | F | V | R | R | E | G | L | G | K | L | V | V | G | L | P | L | R | T | D | L | K | E | S | A | Q | A | G | K | V | L | P | L | V | E | A | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |
| S |
|
| S | S |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
|
|
|
| S | S | S |
|
|
| S | S | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | R | F | G | V | E | V | K | L | H | D | E | R | L | S | T | V |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . |   |
|
|
|   |   |   |
|
|
|   |
|
|
|
Template Sequence |   |
R | A | R | . |
G | V | E | V | E | L | W | D | E | R | F | T | T | K |
Template Known Secondary structure |   |
 |  | T | . | T |
|  |  |  |  |  |
|
| S |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |