Job Description P0A8I1 Confidence 46.66% Date Thu Jan 5 11:07:53 GMT 2012 Rank 107 Aligned Residues 119 % Identity 14% Template c3agjB_ PDB info PDB header:translation/hydrolase Chain: B: PDB Molecule:protein pelota homolog; PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	A	F	D	F	G	T	K	S	I	G	V	A	V	G	Q	R	I	T	G	T	A	R	P	L	P	A	I	K	A	Q	D	.	.	.	.	.	.	.	.	.	.	.	G	T	P	D	W	N	I	I	E	R	L	L	K	E	W	Q	P	D	E	I	I	V	G	L	P	L	N	M	D	G	T	E	Q	P	L	T
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	A	V	D	Y	D	E	F	A	L	A	V	L	A	G	H	G	M	K	I	L	E	D	T	S	A	R	L	P	G	K	D	D	P	S	R	E	Q	E	V	E	K	Y	V	D	R	A	A	K	R	I	V	E	E	A	A	R	H	R	S	P	I	A	V	I	A	G	P	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure							S	S									S	S															T	T	S	T	T																								T		S							S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.
Predicted Secondary structure																	.																																									.	.
Query SS confidence																	.																																									.	.
Query Sequence		A	R	A	R	K	F	A	N	R	I	H	G	R	F	G	.	V	E	V	K	L	H	D	E	R	L	S	T	V	E	A	R	S	G	L	F	E	Q	G	G	Y	R	A	L	N	K	G	K	V	D	S	A	S	A	V	I	.	.	I	L	E	S	Y	F	E	Q
Query Conservation																	.																																									.	.
Alig confidence																	.																.	.	.																							.	.
Template Conservation																																	.	.	.
Template Sequence		Q	L	K	T	S	V	A	E	K	V	Q	R	A	M	P	S	L	K	V	A	T	V	D	T	S	M	G	G	V	A	G	.	.	.	V	R	E	A	L	R	R	E	S	V	T	R	I	L	R	E	L	S	I	V	E	A	E	G	V	L	E	E	F	L	R	R
Template Known Secondary structure		S													S	T	T	S								S							.	.	.					T	T	S							T	T	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions