 |
Job Description | P0A8I1 | Confidence | 26.90% | Date | Thu Jan 5 11:07:53 GMT 2012 |
Rank | 137 | Aligned Residues | 73 |
% Identity | 14% | Template | c2obnA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:hypothetical protein; |
PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution
|
Resolution | 2.30 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | V | G | Q | R | I | T | G | T | A | R | P | L | P | A | I | K | A | Q | D | G | T | P | D | W | N | I | I | E | R | L | L | K | E | W | Q | P | . |
. |
D | E | I | I | V | G | L | P | L | N | M | D | G | T | E | Q | P | L | T | A | R | A | R | K | F | A | N | R | I | H | G | R | F | G | V | E | V | K |
Query Conservation |   |
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
| . | . |   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
| . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
V | L | V | H | R | A | G | Q | T | H | N | G | N | N | P | H | V | P | I | P | P | L | P | E | V | I | R | L | Y | E | T | V | A | S | G | G | G | A | F | G | T | V | P | V | V | G | I | A | L | N | T | A | H | L | D | . |
. |
. |
E | Y | A | A | K | E | A | I | A | H | T | I | A | E | T | G | L | P | C | T |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
| B |
| S | S |
| T | T | S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
|
|
|  |  |  |  |  |  |  |
| T | T | S |
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|