Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8I1
Confidence31.74%DateThu Jan 5 11:07:53 GMT 2012
Rank128Aligned Residues86
% Identity10%Templatec2ivoC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:up1; PDBTitle: structure of up1 protein
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30....... ..40.........50.. .......60.......
Predicted Secondary structure 










............

.....










Query SS confidence 
































. . . . . . . . . . . .














. . . . .














Query Sequence  LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD. . . . . . . . . . . . GTPDWNIIERLLKEW. . . . . QPDEIIVGLPLNMDG
Query Conservation 




 
  





 
     
 

  
    ............       
   
   ..... 
  





    
Alig confidence 
































............














.....







.....

Template Conservation 



 

  
 
 


 

 

            
  
  
   
   
   
   
  


   


 



..... 
Template Sequence  ALGIEGTAHTLGIGIVSEDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFS. . . . . QG
Template Known Secondary structure 
SSS
SS



SS
S

T

TTT

.....
Template Predicted Secondary structure 





















.....

Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70..... ..
 
   68.70... ......80.........90.....
Predicted Secondary structure 


.



Query SS confidence 





.





















Query Sequence  TEQPLT. ARARKFANRIHGRFGVEVKLHD
Query Conservation        .  
  
   
     
 
 
 
Alig confidence 





.





















Template Conservation 

    
  
      
          
 
Template Sequence  PGLGPALRVVATAARALAVKYRKPIVGVN
Template Known Secondary structure  SS
TT

Template Predicted Secondary structure 













Template SS confidence 




























   78.80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions