Job Description P0A8I1 Confidence 94.60% Date Thu Jan 5 11:07:53 GMT 2012 Rank 32 Aligned Residues 106 % Identity 12% Template c1z05A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																											.																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.																											.	.	.	.	.	.	.	.	.
Query Sequence		S	G	T	L	L	A	F	D	F	G	T	K	S	I	G	V	A	V	G	Q	R	I	T	G	T	.	A	R	P	L	P	A	I	K	A	Q	D	G	T	P	D	W	N	I	I	E	R	L	L	K	E	W	.	.	.	.	.	.	.	.	.	Q	P	D	E	I	I	V	G	L	P	L	N	M	D	G	T	E	Q	P
Query Conservation																											.																											.	.	.	.	.	.	.	.	.
Alig confidence																											.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	W	Q	F	L	S	M	R	L	G	R	G	Y	L	T	I	A	L	H	E	L	G	G	E	V	L	I	D	T	K	I	D	I	H	E	I	D	Q	D	D	V	L	A	R	L	L	F	E	I	E	E	F	F	Q	T	Y	A	A	Q	L	D	R	V	T	S	I	A	I	T	L	P	G	L	V	N	S	E	Q	G	I
Template Known Secondary structure		T										T	T									T	T	S														B																			T	T	T	T												S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		72	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		L	T	A	.	.	.	.	.	.	R	A	R	K	F	A	N	R	I	H	G	R	F	G	V	E	V	K	L	H	D	E	R	L	S	T	V	E	A	R	S	G	L
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	Q	M	P	H	Y	N	V	K	N	L	A	L	G	P	E	I	Y	K	A	T	G	L	P	V	F	V	A	N	D	T	R	A	W	A	L	A	E	K	L	F
Template Known Secondary structure						S	S	S	B		S	S	B												S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions