Job Description P39383 Confidence 100.00% Date Thu Jan 5 12:00:15 GMT 2012 Rank 2 Aligned Residues 234 % Identity 22% Template d2ewsa1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Fumble-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		M	A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	G	R	Q	L	V	D	F	A	D	K	Q	.	.	.	.	V	T	E
Query Conservation																																																																											.	.	.	.
Alig confidence				.	.																														.	.	.	.	.	.											.	.																							.	.	.	.
Template Conservation				.	.																														.	.	.	.	.	.											.	.
Template Sequence		M	K	.	.	V	G	I	D	A	G	G	T	L	I	K	I	V	Q	E	Q	D	N	Q	R	T	F	K	T	E	L	T	K	N	.	.	.	.	.	.	I	D	Q	V	V	E	W	L	N	Q	.	.	Q	Q	I	E	K	L	C	L	T	G	G	N	A	G	V	I	A	E	N	I	N	I	P	A	Q	I	F	V	E
Template Known Secondary structure				.	.							S	S									S	S									G	G	G	.	.	.	.	.	.										T	.	.	S			S						S	T	T						T	T	S	S	S
Template Predicted Secondary structure				.	.																														.	.	.	.	.	.											.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		77	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																									.	.
Query SS confidence													.	.	.	.	.																									.	.
Query Sequence		I	S	C	H	G	L	G	A	R	F	L	.	.	.	.	.	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	.	.	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S	I	T	E
Query Conservation													.	.	.	.	.																									.	.
Alig confidence													.	.	.	.	.																									.	.																										.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		F	D	A	A	S	Q	G	L	G	I	L	L	K	E	Q	G	H	D	L	A	D	Y	I	F	A	N	V	G	T	G	T	S	L	H	Y	F	D	G	Q	S	Q	R	R	V	G	G	I	G	T	G	G	G	M	I	Q	G	L	G	Y	L	L	S	Q	I	T	D	Y	.	.	.	.	.	K	Q	L	T	D	M	A	Q
Template Known Secondary structure																T	T				S								S	S	S								S	S									S		S																		.	.	.	.	.								T
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.
		150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																																															.	.	.																		.
Query SS confidence					.	.	.	.	.	.	.	.																																															.	.	.																		.
Query Sequence		N	V	T	.	.	.	.	.	.	.	.	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	.	.	.	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	C	.	Q	K
Query Conservation					.	.	.	.	.	.	.	.																																															.	.	.																		.
Alig confidence					.	.	.	.	.	.	.	.																																															.	.	.																		.
Template Conservation
Template Sequence		H	G	D	R	N	T	I	D	L	K	V	R	H	I	I	P	G	D	L	T	A	A	N	F	G	H	V	L	H	H	L	D	A	D	F	T	P	S	N	K	L	A	A	V	I	G	V	V	G	E	V	V	T	T	M	A	I	T	V	A	R	E	F	K	T	E	N	I	V	Y	I	G	S	S	F	H	N	N	A	L
Template Known Secondary structure		T				T	T	T				T	T	T				T	T	S				T	T	T	T	G	G	G		T	T	S																														T	T								S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		218	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		F	A	R	M	L	E	S	H	L	.	.	.	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		L	R	K	V	V	E	D	Y	T	V	L	R	G	C	K	P	Y	Y	V	E	N	G	A	F	S	G	A	I	G	A	L	Y	L	E	K
Template Known Secondary structure													T	T							T	T	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions