|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | |
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |
|
| . | . |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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| . |
. |
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| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
A | Y | S | I | G | I | D | S | G | S | T | A | T | K | G | I | L | L | A | . |
. |
D | G | V | I | T | R | R | F | L | V | P | T | . |
. |
P | F | R | P | A | T | A | I | T | E | A | W | E | T | L | R | E | G | L | E | T | T | P | F | L | T | L | T | G | Y | . |
. |
. |
. |
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. |
Query Conservation |   |
  |   |   |
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|   |
|   |
|   |   |
|   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . |
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| . | . |
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | Y | A | L | V | G | D | V | G | G | T | N | A | R | L | A | L | C | D | I | A | S | G | E | I | S | Q | A | K | T | Y | S | G | L | D | Y | P | S | L | E | A | V | I | R | V | Y | L | E | E | H | K | V | E | V | K | D | G | C | . |
I | A | I | A | C | P | I | T | G | D | W | V | A | X | T | N | H | T | W | A | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  | G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  | S |
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|
|  |  |  | . |  |  |  | S | S |
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|
| S | S |  |  |
|
| S | S | S |
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|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  | . |  |  |  |
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|  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
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. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  | . |
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|  |  |  |  |  |  |  |
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|
Query SS confidence |   |
. |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
. |
. |
. |
. |
. |
G | R | Q | L | V | D | F | A | D | K | Q | V | T | E | I | S | C | H | G | L | G | . |
. |
. |
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. |
. |
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. |
A | R | F | L | A | P | A | T | R | A | V | I | D | I | G | G | Q | D | S | K | V | I | Q | L | D | . |
D | D | G | N | L | C | D | F | L | M | N | D | K | C |
Query Conservation |   |
. | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |
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|
|   |   |   |   |
|   |   |
|   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |
Template Sequence |   |
S | I | A | E | X | K | K | N | L | G | F | S | H | L | E | I | I | N | D | F | T | A | V | S | X | A | I | P | X | L | K | K | E | H | L | I | Q | F | G | G | A | E | P | V | E | G | K | P | I | A | V | Y | G | A | G | T | G | L | G | V | A | H | L | V | H | V | D | K | R | W | V | S | L | P | G | E | G | G | H | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| G | G | G |  |  |  |
| S | S |
|
|
|
| T | T |
|
|  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| G | G | G | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |
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|
|  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |
Template SS confidence |   |
|
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
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. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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|
| . |
. |
. |
. |
. |
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| . |
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|
Query Sequence |   |
A | A | G | T | G | R | F | L | E | V | I | S | R | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | S | V | E | Q | L | D | S | I | T | E | N | V | T | P | H | A | I | T | S | M | C | T | V | F | A | E | S | E | A | I | S | L | R | S | A | G | V | A | P | E | . |
A | I | L | A | G | V | I | N | A | M |
Query Conservation |   |
  |   |
|   |
|   |   |
|
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   | . |
|
|   |
|   |
|   |   |   |
|
Alig confidence |   |
|
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| . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | F | A | P | N | S | E | E | E | A | I | I | L | E | I | L | R | A | E | I | G | H | V | S | A | E | R | V | L | S | G | P | G | L | V | N | L | Y | R | A | I | V | K | A | D | N | R | L | P | E | N | L | K | P | K | D | I | T | E | R | A | L | A | D | S | C | T | D | C | R | R | A | L | S | L | F | C | V | I | X |
Template Known Secondary structure |   |
B |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
| B | G | G | G | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
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|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
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|  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | |
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. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |
|
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| . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
A | R | R | S | A | N | F | I | A | R | L | S | C | E | A | P | I | L | F | T | G | G | V | S | H | . |
C | Q | K | F | A | R | M | . |
. |
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. |
L | E | S | H | L | R | M | P | V | N | T | H | P | D | A | Q | F | A | G | A | I | G | A | A | V | I | G | Q | R | V | R | T | R | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | R | F | G | G | N | L | A | L | N | L | G | T | F | G | G | V | F | I | A | G | G | I | V | P | R | F | L | E | F | F | K | A | S | G | F | R | A | A | F | E | D | K | G | R | F | K | E | Y | V | H | D | I | P | V | Y | L | I | V | H | D | N | P | G | L | L | G | S | G | A | H | L | R | Q | T | L | G | H | I |
Template Known Secondary structure |   |
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| T | T |  |  |  |  |  |
| S | S | S | G | G | G |  |  |  |  |  |  | S | S |  |  |  |  |  |  |
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| G | G | G |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
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