Job Description P39383 Confidence 99.41% Date Thu Jan 5 12:00:15 GMT 2012 Rank 46 Aligned Residues 240 % Identity 18% Template c3vgkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glucokinase; PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus Resolution 3.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.
Predicted Secondary structure																				.																																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	.	.	.	.	F	L	T	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																				.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	G	V	D	I	G	G	T	K	I	A	A	G	V	V	D	E	E	G	R	I	L	S	T	F	K	V	A	T	P	P	T	A	E	G	I	V	D	A	I	C	A	A	V	A	G	A	S	E	G	H	D	V	E	A	V	G	I	G	A	A	G	Y	V	D	D	K	R	A	T	V	L	F	A	P	N	I	D
Template Known Secondary structure										T	T									T	T													S	S	S	S	T													T	T	T											S	S				T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
											63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																															.	.	.																																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																															.	.	.																																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	.	.	.	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																															.	.	.																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.																															.	.	.																			.	.	.																.	.
Template Conservation																																																														.	.	.
Template Sequence		W	R	H	E	P	L	K	D	K	V	E	Q	R	V	G	L	P	V	V	V	E	N	D	A	N	A	A	A	W	G	E	Y	R	F	G	A	G	Q	G	H	D	D	V	I	C	I	T	L	G	T	G	L	G	G	G	I	I	I	G	N	.	.	.	K	L	R	R	G	R	F	G	V	A	A	E	F	G	H	I	R
Template Known Secondary structure																	S																		T	S	T	T	S	S		S	S							S	S	S								T	T	.	.	.						S	S	S					G	G	G	S	B
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																										129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		V	V	P	D	G	L	L	C	G	C	G	S	Q	G	C	W	E	Q	Y	A	S	G	R	A	L	V	R	Y	A	K	Q	R	A	N	A	T	P	E	N	A	A	V	L	L	G	L	G	D	G	S	V	D	G	I	E	G	K	H	I	S	E	.	.	.	.	A	A	R	Q	G	D	P	V	A	V	D	S	F	R	E
Template Known Secondary structure			S	T	T		S	B		T	T	S	S	B		B	G	G	G	T	S	S																G	G	G								S	S	S	S	T	T										.	.	.	.			T	T	T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.												.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	.	C	Q	K	F	A	R	M	L	E	S	H	L	R	.	.	.	.	.	.	.	.	.	.	.	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q	R
Query Conservation																																.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.													.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		L	A	R	W	A	G	A	G	L	A	D	L	A	S	L	F	D	.	P	S	A	F	I	V	G	G	G	V	S	D	E	G	E	L	V	L	D	P	I	R	K	S	F	R	R	W	L	I	G	G	E	W	R	P	H	A	Q	V	L	A	A	Q	L	G	G	K	A	G	L	V	G	A	A	D	L	A	R	Q
Template Known Secondary structure																			.		S						S	T	T	G	G	G	T																S	S	T	T	T	S									S	S	G	G	G										T	T
Template Predicted Secondary structure																			.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions