Job Description P39383 Confidence 99.26% Date Thu Jan 5 12:00:15 GMT 2012 Rank 56 Aligned Residues 244 % Identity 17% Template c3r8eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical sugar kinase; PDBTitle: crystal structure of a hypothetical sugar kinase (chu_1875) from2 cytophaga hutchinsonii atcc 33406 at 1.65 a resolution Resolution 1.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																				.											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	.	.	.	.	.	P	T	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	I	L	G	I	D	V	G	G	T	S	V	K	F	G	L	V	T	P	E	G	E	I	Q	N	A	T	R	F	X	T	A	D	W	V	N	G	I	G	F	V	E	S	X	K	L	E	I	G	N	F	L	K	Q	Y	P	I	V	K	G	V	G	I	G	W	P	G	L	V	S	L	D	R	T	K	V	I	L	L	P
Template Known Secondary structure										S	S									T	T																T	T	T																		T	T									S	S				T	T	S						B	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																	64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	.	.	.	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																								.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		N	I	P	S	V	V	N	V	P	I	V	E	I	L	R	S	E	F	P	H	I	H	F	K	I	E	N	D	A	K	C	A	A	L	G	E	Y	Y	F	G	E	N	K	R	X	Q	T	F	I	L	L	A	L	G	T	G	V	G	S	G	V	X	X	N	G	.	.	.	K	L	F	I	G	G	R	G	N	G	T	E
Template Known Secondary structure		T	B					S												T	T	S																			S	T	T	T	T		S	S							S	S	S								T	T	.	.	.						T	T	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.
		126	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																																	.
Query SS confidence							.	.	.	.	.	.	.																																																	.
Query Sequence		T	G	R	F	L	.	.	.	.	.	.	.	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	.	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I
Query Conservation							.	.	.	.	.	.	.																																																	.
Alig confidence							.	.	.	.	.	.	.																																																	.
Template Conservation
Template Sequence		V	G	H	X	L	T	T	R	G	K	S	L	E	N	Q	V	G	I	N	H	L	I	A	Y	T	H	E	Q	L	A	L	D	V	A	K	K	S	S	L	H	T	I	A	E	L	S	P	K	V	I	A	D	H	A	A	Q	G	D	A	L	A	L	A	V	W	A	D	I	G	T	I	I	G	E	S	L	V	N	I	V
Template Known Secondary structure		G	G	G		B		T	T	S	S	B	S					S																T	T				S	G	G	G		S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																				.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.												.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	C	.	Q	K	F	A	R	M	L	E	S	H	L	.	.	.	.	.	.	.	.	.	.	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q	R
Query Conservation																				.												.	.	.	.	.	.	.	.	.	.
Alig confidence						.														.												.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		R	V	X	D	.	L	N	N	I	L	L	G	G	G	I	S	G	A	F	D	Y	F	V	P	N	L	K	K	A	X	L	E	H	L	P	T	Y	Y	T	D	D	X	Y	I	G	K	A	T	L	E	N	D	A	G	L	L	G	A	A	G	L	I	X	E
Template Known Secondary structure						.								S	G	G	G	G	G																S						T	T							S	S	G	G	G
Template Predicted Secondary structure						.
Template SS confidence
		238	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions