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Job DescriptionP39383
Confidence97.47%DateThu Jan 5 12:00:15 GMT 2012
Rank101Aligned Residues170
% Identity18%Templatec3qb0C_
PDB info PDB header:structural proteinChain: C: PDB Molecule:actin-related protein 4; PDBTitle: crystal structure of actin-related protein arp4 from s. cerevisiae2 complexed with atp
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  VTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTP
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Template Sequence  APTSTCVSFAAGR. . . PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAG. . KFINHLIKKALEPKEIIPLFAIKQRKP
Template Known Secondary structure  T
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TT
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S
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   140.........150.. .......160.........170.........180....... ..190.........200.........210....
 
   154.....160.........170.........180........
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Query Sequence  HAITSMCTVFAESEAISLRSAGVAPEAILAGVINA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFL
Template Known Secondary structure  S



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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   189190.........200... ......210.........220....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MARRSANFIARLSCE. . . . . . APILFTGGVSHCQKFARMLES
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Template Sequence  PKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKNNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMT
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   295....300.........310.........320.........330.........340.........350.........360.........370....
 
   225. ...230..... ....240........
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Query Sequence  HL. . . . . . . RMPVNTHPD. . . AQFAGAIGAAVIG
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Template Sequence  ELNKILPSLKFRILTTGHTIERQYQSWLGGSILT
Template Known Secondary structure  STTS




S
GGGGGS
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   427..430.........440.........450.........460
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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