Job Description P39383 Confidence 98.21% Date Thu Jan 5 12:00:15 GMT 2012 Rank 82 Aligned Residues 219 % Identity 21% Template c3p4iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetate kinase; PDBTitle: crystal structure of acetate kinase from mycobacterium avium Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																		.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.																		.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	I	T	R	R	F	L	V	P	T	P	.	.	.	.	.	.	.	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	.	.	.	.	.	L	E	T	T	P	F	L	T	L	T	G	Y	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.																		.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.																		.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	V	L	V	I	N	S	G	S	S	S	L	K	F	Q	L	V	D	P	E	S	G	V	A	A	S	T	G	I	V	E	R	I	E	S	S	P	V	P	D	H	D	A	A	L	R	R	A	F	D	M	L	A	G	D	G	V	D	L	N	T	A	G	L	V	A	V	G	H	R	V	V	H	G	G	N	T	F	Y
Template Known Secondary structure											S	S									T	T	T																S			S															T	T			T	T	T	T	T									S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
														63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	T	V	L	D	D	A	V	I	A	R	L	H	E	L	S	E	L	A	P	L	H	N	P	P	A	L	L	G	I	E	V	A	R	R	L	L	P	G	I	A	H	V	A	V	F	D	T	G	F	F	H	D	L	P	P	A	A	A	T	Y	A	I	D	R	E	L	A	D	R	W	Q	I	R	R	Y	G	F	H
Template Known Secondary structure		S													G	G	G	T	T	T		T	T	T																T	T	S							T	T	G	G	G	T	T									S	S									T		S				S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
																										94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.												.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	.	.	.	.	.	.	.	.	.	.	.	T	G	R	F	L	E	V	I	S	R	T	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																		.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																								.																																		.
Template Sequence		G	T	S	H	R	Y	V	S	E	Q	A	A	A	F	L	D	R	P	L	R	G	L	K	Q	I	V	L	H	L	G	N	G	C	S	A	S	A	I	.	A	G	T	R	P	L	D	T	S	M	G	L	T	P	L	E	G	L	V	M	G	T	R	S	G	D	I	D	P	S	V	V	S	.	Y	L	C	H	T	A	G
Template Known Secondary structure																	T	S		G	G	G									S	S	S							.		T	T						S			S	S	T	T	S	S	S			S	S				S			T					.
Template Predicted Secondary structure																																								.																																		.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																														.	.	.														.																																			.
Query SS confidence																														.	.	.														.																																			.
Query Sequence		T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	.	.	.	E	A	I	S	L	R	S	A	G	V	A	P	E	.	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	.
Query Conservation																														.	.	.														.																																			.
Alig confidence															.	.	.	.	.											.	.	.														.																																			.
Template Conservation															.	.	.	.	.
Template Sequence		M	G	V	D	D	V	E	S	M	L	N	H	R	.	.	.	.	.	S	G	V	V	G	L	S	G	V	R	D	F	R	R	L	R	E	L	I	E	S	G	D	G	A	A	Q	L	A	Y	S	V	F	T	H	R	L	R	K	Y	I	G	A	Y	L	A	V	L	G	H	T	D	V	I	S	F	T	A	G	I	G	E
Template Known Secondary structure														S	.	.	.	.	.								S				T									T	T																											S	S												T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	Q	K	F	A	R	M	L	E	S	H	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	A	A	V	R	R	D	A	V	S	G	M	E
Template Known Secondary structure		T										T	T		G
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions