Job Description P39383 Confidence 35.39% Date Thu Jan 5 12:00:15 GMT 2012 Rank 183 Aligned Residues 232 % Identity 19% Template c3nuwC_ PDB info PDB header:transferase Chain: C: PDB Molecule:2-oxo-3-deoxygalactonate kinase; PDBTitle: crystal structure of 2-oxo-3-deoxygalactonate kinase from klebsiella2 pneumoniae Resolution 2.09 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																																													.	.
Query SS confidence																														.	.	.	.	.	.																																													.	.
Query Sequence		S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	I	T	R	R	F	L	V	P	.	.	.	.	.	.	T	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	G	R	Q	L	V	D	F	A	D	K	Q	V	T	.	.
Query Conservation																														.	.	.	.	.	.																																													.	.
Alig confidence																														.	.	.	.	.	.																																													.	.
Template Conservation
Template Sequence		Y	I	A	I	D	W	G	S	T	N	L	R	A	W	L	Y	Q	G	E	E	C	L	E	S	R	Q	S	E	A	G	V	T	R	L	N	G	R	S	P	A	A	V	L	A	E	I	T	Q	H	W	R	D	G	A	T	P	V	V	X	A	G	X	V	G	S	N	V	G	W	K	I	A	P	Y	L	P	L	P	A	A
Template Known Secondary structure									S	S									T	T									S			T	T			T	T											T	T	T	T			S	S								G	G	G	S	T	T	S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																																			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.										.	.	.	.	.
Template Conservation																																																	.	.																	.										.	.	.	.	.
Template Sequence		F	S	D	I	G	Q	Q	L	T	A	V	G	D	N	I	W	I	I	P	G	L	C	V	S	R	D	D	N	H	N	V	X	R	G	E	E	T	Q	L	L	G	A	R	A	L	A	P	.	.	S	S	V	Y	V	X	P	G	T	H	C	K	W	V	L	A	.	D	R	R	Q	I	H	D	F	R	.	.	.	.	.
Template Known Secondary structure							T	S						T	T												T	T						S	S												S		.	.		S						S	S	S							.		S	S							.	.	.	.	.
Template Predicted Secondary structure																																																	.	.																	.										.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.															.
Query SS confidence																	.	.	.	.	.	.	.	.	.															.
Query Sequence		A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	.	.	.	.	.	.	.	.	.	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	.	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R
Query Conservation																	.	.	.	.	.	.	.	.	.															.
Alig confidence																	.	.	.	.	.	.	.	.	.															.										.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		T	V	L	T	G	E	L	H	H	L	L	L	Q	L	S	L	V	G	A	G	L	P	P	Q	E	T	S	A	A	A	F	A	A	G	L	Q	R	G	I	N	N	P	A	V	L	P	Q	L	.	.	.	.	F	E	V	R	A	S	H	V	L	G	A	L	P	R	E	Q	V	S	E	F	L	S	G	L	L	I	G	A
Template Known Secondary structure															T	S	T	T	T	T	T																				T		S	S						.	.	.	.									T	T	S	S		G	G	G
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	C	Q	K	F	A	R	M	L	E	S	H	L	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q
Query Conservation		.
Alig confidence		.																																.							.
Template Conservation																																		.							.
Template Sequence		E	V	A	T	L	S	D	T	F	A	G	Q	Q	A	I	S	L	V	A	G	S	S	L	T	S	R	Y	Q	Q	A	F	A	.	A	I	G	R	E	V	.	S	A	V	A	G	D	T	A	F	Q	T	G	I	R	S	I	A	Y
Template Known Secondary structure							T	T	T	T			S	S																				.		T	T				.
Template Predicted Secondary structure																																		.							.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions