|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
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. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
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. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |  |  |  | . | . |
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|
|  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
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|
|
|
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|
| . |
. |
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| . |
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Query Sequence |   |
S | I | G | I | D | S | G | S | T | A | T | K | G | I | L | L | A | . |
. |
D | G | V | I | T | R | R | F | L | V | P | T | P | F | . |
. |
. |
. |
. |
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. |
. |
. |
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. |
R | P | A | T | A | I | T | E | A | W | E | T | L | R | E | G | L | E | T | T | P | F | L | T | L | T | G | Y | G |
Query Conservation |   |
  |
|
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|   |
|   |
|   |   |
|   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
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|   |
|
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |
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|   |
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|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
Template Sequence |   |
I | G | V | I | D | X | G | T | N | T | F | H | L | L | I | T | D | I | V | N | D | R | P | H | T | L | V | N | E | K | S | A | V | G | L | G | K | G | G | I | T | K | G | F | I | T | E | E | A | X | D | R | A | L | D | T | L | K | K | F | R | V | I | L | D | E | H | A | V | V | H | V | I | A | T | G | T | S | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S | T | T | T | G | G | G | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
64 | . | . | . | . | . | 70 | |
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. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
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|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
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|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
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|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
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Query Sequence |   |
R | Q | L | V | D | F | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
. |
. |
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. |
D | K | Q | V | T | E | I | S | C | H | G | L | G | A | R | F | L | A | P | A | T | R | . |
. |
. |
A | V | I | D | I | G | G | Q | D | S | K | V | I | Q | L | D | D | D | G | N | L | C | D | F | L | M | N | D | K | C | A | A |
Query Conservation |   |
  |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   | . | . | . |   |
|
|
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|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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| . | . | . |
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| . |
|
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|
|
| . | . | . |
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|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   | . |   |   |   |   |   |   |   |   | . | . | . |   |
|
|   |
|
Template Sequence |   |
R | S | G | S | N | K | Q | V | L | I | D | R | I | K | K | E | V | N | I | D | V | E | V | I | D | G | A | R | E | A | E | L | I | F | R | G | V | Q | Q | A | V | P | X | E | D | H | I | S | L | A | X | D | I | G | G | G | S | V | E | F | I | I | G | . |
N | K | N | E | I | L | W | K | . |
. |
. |
Q | S | F | E | I |
Template Known Secondary structure |   |
 |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T |
|
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  | . |
| S | S |
|  |  |  |  | . | . | . |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  | . | . | . |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
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|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . | . | . | . | |
|
|
. | . | . | . | 160 |
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | G | R | F | L | E | V | I | S | R | T | L | G | T | S | V | E | Q | L | D | S | I | T | E |
Query Conservation |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | G | Q | R | L | I | D | R | F | H | V | H | D | P | X | R | E | D | D | R | V | X | X | H | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |