Job Description P39383 Confidence 98.34% Date Thu Jan 5 12:00:15 GMT 2012 Rank 79 Aligned Residues 224 % Identity 17% Template c3mcpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase (bdi_1628) from parabacteroides2 distasonis atcc 8503 at 3.00 a resolution Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.
Predicted Secondary structure																					.																.	.	.	.																					.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																.	.	.	.																					.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	.	.	.	.	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	.	.	.	F	L	T	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.																.	.	.	.																					.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																.	.	.	.																					.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	V	X	T	L	D	A	G	G	T	N	F	V	F	S	A	I	Q	G	G	K	E	I	A	D	P	V	V	L	P	A	C	A	D	C	L	D	K	C	L	G	N	L	V	E	G	F	K	A	I	Q	A	G	L	P	E	A	P	V	A	I	S	F	A	F	P	G	P	A	D	Y	Q	A	G	I	I	G	D	L
Template Known Secondary structure										S	S	S									T	T				S									T	T																		T	T		S	S											S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																														.
Template Sequence		P	N	F	P	S	F	R	G	G	V	A	L	G	P	F	L	E	D	I	F	G	I	P	V	F	I	N	N	D	G	S	L	F	A	Y	G	E	A	L	T	G	V	L	P	E	I	N	R	R	L	R	E	A	G	S	T	K	R	Y	K	N	L	L	G	V	T	L	G	T	G	F	G	A	G	V	V	.	I	D	G
Template Known Secondary structure		T	T		G	G	G	T	T		B												S																		T	S												T	T														S	S	S							.		T	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.
		112	.	.	.														.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		N	L	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	.	.	.	.	.	.	.	.	.	.	.	S	V	E	Q	L	D	S	I	T	E	N	V	T	.	P	H	A	I	T	S	M	C	T	V	F	A	E	S
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	L	R	G	D	N	A	A	G	G	Y	V	W	C	L	R	N	K	K	Y	P	E	Y	I	V	E	E	S	V	S	I	R	A	V	X	R	V	Y	A	E	R	S	G	D	A	G	A	R	T	P	K	E	I	F	E	I	A	E	G	I	R	P	G	N	R	E	A	A	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	S		T	T			T	T	S	B		S	S		T	T	S	B	G	G	G	T	S	S												S	S			S													T	S	S		S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																		.													.	.	.	.	.
Query SS confidence																																																		.													.	.	.	.	.
Query Sequence		E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	.	C	Q	K	F	A	R	M	L	E	S	H	L	.	.	.	.	.	R	M	P	V	N	T	H	P	D	A	Q	F	A	G
Query Conservation																																																		.													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.		.											.													.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																							.		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	E	E	L	G	E	X	A	G	D	A	L	A	S	A	I	T	L	I	D	.	G	.	L	I	V	I	G	G	G	L	S	G	A	S	K	Y	I	L	P	V	L	L	K	E	X	N	A	Q	T	G	X	X	Q	K	E	V	Y	D	L	D	E	E	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	S	.						S	G	G	G	G	G																T	T									T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																							.		.
Template SS confidence
															237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		241	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	A	A	V	I	G	Q	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	G	F	A	R	G	E	A	V	E
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions