Job Description P39383 Confidence 99.31% Date Thu Jan 5 12:00:15 GMT 2012 Rank 55 Aligned Residues 224 % Identity 14% Template c3htvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																					.													.	.	.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.													.	.	.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	.	.	.	.	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	.	T	T	P	F	L	T	L	T	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.													.	.	.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.													.	.	.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	V	A	G	V	D	X	G	A	T	H	I	R	F	C	L	R	T	A	E	G	E	T	L	H	C	E	K	K	R	T	A	E	V	I	A	P	G	L	V	S	G	I	G	E	X	I	D	E	Q	L	R	R	F	N	A	R	C	H	G	L	V	X	G	F	P	A	L	V	S	K	D	K	R	T	I	I	S	T
Template Known Secondary structure											S	S									T	T	S															T	T																		T											S	S		B		T	T	S	S		B		S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
																			64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	.	.	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																												.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	C	P	V	E	F	S	R	D	V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G	T	G	X	G	F	A	V	W	X	N	G	A	P	W	T	.	.	.	.	G	A	H	G	V	A
Template Known Secondary structure			S	S	S							T	T										T	S																			T	T		T	T	S								S	S	S								T	T					.	.	.	.		S	S	S
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	T	N	C	S	G	X	A	L	R	R	W	Y	E	Q	Q	P	R	N	Y	P	L	R	D	L	F	V	H	A	E	N	A	P	F	V	Q	S	L	L	E	N	A	A	R	A	I	A	T	S	I	N	L	F	.	.	.	.	.	D	P	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S									T	T	S			S	S		G	G	G						T	T																							.	.	.	.	.			S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template SS confidence
		162																		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.
		205	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure												.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		P	I	L	F	T	G	G	V	S	H	.	.	.	.	.	C	Q	K	F	A	R	M	L	E	S	H	L	R	M	.	.	.	.	.	.	.	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q	R	V
Query Conservation												.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	I	L	G	G	G	V	X	D	X	P	A	F	P	R	E	T	L	V	A	X	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	S	D	F	N	G	A	Q	G	A	A	I	L	A	H	Q	R
Template Known Secondary structure								T	T	T	T	S	T	T													T	S		T	T	T	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions