Job Description P39383 Confidence 100.00% Date Thu Jan 5 12:00:15 GMT 2012 Rank 3 Aligned Residues 219 % Identity 18% Template c3h1qB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:ethanolamine utilization protein eutj; PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60							.	.	.
Predicted Secondary structure																					.															.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.	.
Query SS confidence																					.															.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	P	F	.	.	.	.	.	.	.	.	.	.	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	.	T	T	P	F	L	T	L	T	.	.	.	.	.	.	G	Y	G
Query Conservation																					.															.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.	.
Alig confidence																					.															.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.	.
Template Conservation
Template Sequence		P	Y	K	V	G	V	D	L	G	T	A	D	I	V	L	V	V	T	D	Q	E	G	I	P	V	A	G	A	L	K	W	A	S	V	V	K	D	G	L	V	V	D	Y	I	G	A	I	Q	I	V	R	E	L	K	A	K	V	E	R	L	L	G	S	E	L	F	Q	A	A	T	A	I	P	P	G	T	V	G	R	N
Template Known Secondary structure											S	S									T	T																T	T			T	T																			S	S	S											T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		64	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		R	Q	L	V	D	F	A	.	.	.	.	.	.	.	.	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.														.	.	.																						.									.	.	.
Template Conservation																														.	.	.																						.									.	.	.
Template Sequence		A	E	A	C	G	H	V	V	A	G	A	G	L	E	L	V	T	L	V	D	E	P	V	A	A	A	R	A	.	.	.	L	G	I	N	D	G	I	V	V	D	I	G	G	G	T	T	G	I	A	V	I	.	E	K	G	K	I	T	A	T	.	.	.	F	D	E	P	T	G	G	T	H	L	S	L	V	L	A	G
Template Known Secondary structure		G	G									T	T																	.	.	.		T		S	S								S	S								.		T	T						.	.	.				S			T
Template Predicted Secondary structure																														.	.	.																						.									.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	C
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	K	I	P	F	E	E	A	E	T	I	K	K	D	F	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	E	I	X	R	V	V	R	P	V	I	E	K	X	A	L	I	V	K	E	V	I	K	N	Y	D	Q	T	L	P	V	Y	V	V	G	G	T	A	Y	L
Template Known Secondary structure			T												T		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T	S		T	T							S	G	G	G	G	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	F	A	R	M	L	E	S	H	L	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	F	S	E	E	F	S	R	F	L	G	K	E	V	Q	V	P	I	H	P	L	L	V	T	P	L	G	I	A	L	F	G
Template Known Secondary structure		T	T										S	S			B			S	S	G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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