Job Description P39383 Confidence 99.71% Date Thu Jan 5 12:00:15 GMT 2012 Rank 13 Aligned Residues 248 % Identity 17% Template c3gbtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:gluconate kinase; PDBTitle: crystal structure of gluconate kinase from lactobacillus acidophilus Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																						.																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.	.	.
Query SS confidence																						.																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.	.	.
Query Sequence		M	A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	.	T	T	P	F	L	T	L	T	G	Y	.	.	.
Query Conservation																						.																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.	.	.
Alig confidence																						.																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.	.	.
Template Conservation
Template Sequence		L	K	Y	I	I	G	X	D	V	G	T	T	A	T	K	G	V	L	Y	D	I	N	G	K	A	V	A	S	V	S	K	G	Y	P	L	I	Q	T	K	V	G	Q	A	E	E	D	P	K	L	I	F	D	A	V	Q	E	I	I	F	D	L	T	Q	K	I	D	G	K	I	A	A	I	S	W	S	S	Q	X	H	S
Template Known Secondary structure												S	S									T	T	S													B		S	S	T	T																							T		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																																				63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	G	L	G	S	D	D	E	L	L	T	N	S	I	T	W	A	D	N	C	A	K	S	I	V	Q	D	A	K	N	R	G	F	A	Q	Q	I	Y	R	K	T	G	X	P	X	H	P	X	A	P	I	Y	K	L	L	W	L	K	N	K	K	T	E	V	F	S	Q	A	Q	K	W	I	G	I	K	E	Y	I	I
Template Known Secondary structure		B					T	T	S		B	S	S					T	T			T	T										T	T													S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	L	T	G	K	L	V	T	D	T	T	X	A	A	G	T	G	I	L	N	L	K	T	L	T	W	D	Q	E	L	L	D	I	L	K	I	K	K	E	Q	L	P	K	I	A	Q	P	T	K	V	I	F	P	I	K	T	E	Y	V	K	K	L	G	I	D	S	D	T	K	I	I	L	G	A	S	D	G	Y	L
Template Known Secondary structure						S										T	T	T	T		B		T	T	T	S	S	B									T			G	G	G	S						T	T														T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
														94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	I	G	V	N	A	I	D	S	D	H	C	A	L	N	V	G	T	S	G	A	I	R	T	I	V	D	Q	P	K	I	D	P	S	A	S	Y	F	C	Y	P	A	D	K	T	H	Y	L	L	G	G	P	V	N	N	G	G	I	V	F	N	W	A	R	Q	T	L	F	D	A	D	E	T	P	Q	D	F	L	D
Template Known Secondary structure					T	T	T			S	T	T							S	S	S								S	S					T	T			S							T	T									S		S												T		T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	.	.	.	.	.	.	.	.	.	.	.	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	.	.	.	.	S	C	E	A	P	I	L	F	T	G	G
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		V	A	Q	T	A	P	A	G	S	R	N	L	I	F	L	P	Y	L	G	G	E	R	A	P	I	W	D	A	N	A	R	G	S	F	V	G	L	T	R	X	H	Q	K	P	E	X	A	R	A	V	I	E	G	I	I	F	N	L	Y	D	A	A	S	N	L	I	K	N	T	K	K	P	V	A	I	N	A	T	G	G
Template Known Secondary structure					T	S		T	T	G	G	G							T	T		B		T	T	T		B	T	T							S			T	T																											T	T	S				S						S	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	H	C	Q	K	F	A	R	M	L	E	S	H	L	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		F	L	K	S	D	F	V	R	Q	L	C	A	N	I	F	N	V	P	I	V	T	X	K	E	Q	Q	.	S	G	T	L	A	A	X	F	L	A	R
Template Known Secondary structure		G	G		S												T	S						S		S		.
Template Predicted Secondary structure																												.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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