Job Description P39383 Confidence 99.63% Date Thu Jan 5 12:00:15 GMT 2012 Rank 23 Aligned Residues 246 % Identity 13% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																					.																				.	.	.	.	.	.	.
Query SS confidence																					.																				.	.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	.	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	.	.	.	.	.	.	.	I	T	E	A	W	E	T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	G	R	Q	L	V	D	F	A	D	K	Q
Query Conservation																					.																				.	.	.	.	.	.	.
Alig confidence																					.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	L	A	V	D	L	G	G	T	N	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	P	K	T	Y	E	E	R	I	N	L	I	L	Q	M	C	V	E	A	A	A	E	A	V	K	L	N	C	R	I	L	G	V	G	I	S	T	D	L	R	T	P	L	S	D	T	L	H	L
Template Known Secondary structure											S	S	S								T	T													S	S																						T	T																						S
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
						74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	.	.	.	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I
Query Conservation		.	.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	G	K	G	L	E	N	F	V	T	L	I	T	G	T	G	I	G	G	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	E	L	G	H	L	V	V	S	L	D	G	P	D	C	S	C	G	S	H	G	C	I	E	A	Y
Template Known Secondary structure																			T	S	T	T	T	T		S	S							S	S	S								T	T						T	T	S					G	G	G		B			S	S			B		T	T	S		B	S	B
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		S	R	T	L	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	.	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V
Query Conservation																																															.
Alig confidence								.																			.	.																			.																								.
Template Conservation								.																			.	.																																											.
Template Sequence		A	S	G	M	A	L	.	Q	R	E	A	K	K	L	H	D	E	D	L	L	L	V	E	G	M	.	.	S	A	V	G	A	L	H	L	I	Q	A	A	K	L	G	N	A	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V	V	N	I	L	H	T	M	N	.	P	S	L	V	I	L	S	G	V	L
Template Known Secondary structure			S					.										T	T		S			S	S		.	.														T	T																												.		S						S	T	T
Template Predicted Secondary structure								.																			.	.																																											.
Template SS confidence
		591	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.			.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.		.	.	.	660	.	.	.	.	.	.
		213	.	.			.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure					.	.												.	.	.	.
Query SS confidence					.	.												.	.	.	.
Query Sequence		S	H	C	.	.	Q	K	F	A	R	M	L	E	S	H	L	.	.	.	.	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q	R	V
Query Conservation					.	.												.	.	.	.
Alig confidence					.	.												.	.	.	.
Template Conservation
Template Sequence		A	S	H	Y	I	H	I	V	K	D	V	I	R	Q	Q	A	L	S	S	V	Q	D	V	D	V	V	V	S	D	L	V	D	P	A	L	L	G	A	A	S	M	V	L	D	Y
Template Known Secondary structure																	S		G	G	G	T	T									S	S													T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions