Job Description P39383 Confidence 99.01% Date Thu Jan 5 12:00:15 GMT 2012 Rank 64 Aligned Residues 246 % Identity 14% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																																					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	I	T	E	A	W	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	P	I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S	L	F
Template Known Secondary structure											S	S							T	T	S	S	S		S													S	S					T						T										S			T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	.	.	.	.	.	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		K	Y	L	R	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T	G	T	V	V	D	S	G	D	G	V	T	H	I	I
Template Known Secondary structure		T	T	S				G	G	G									T	T																T	T			S														G	G	G	G	S	T	T	T		S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	S	V	E	Q	L	D	S	.	.	.	.	.	.	.	.	.	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		P	V	A	E	G	.	.	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	F	V	Q	S	L	L	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V	K	E	F	S	R	F	D	R	L	K	Y	A	S	I	D	V	G	F	E	R	F	L	A	P	E	I	F	F
Template Known Secondary structure					T	T	.	.				G	G	G					S													T	T																	S									T	T				B				B			T					S	G	G	G	G	T
Template Predicted Secondary structure							.	.
Template SS confidence
		195	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.										.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	.	.	.	.	.	.	A	P	I	L	F	T	G	G	V	S	H	C	Q	K	F	A	R	M	L	E	S	H	L	R	.	.	.	.	.	.	.	.	.	M	P	V	N	T	H	P	D	A	Q	F	A	G	A
Query Conservation																													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	E	I	A	S	S	D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	Y	K	N	I	V	L	S	G	G	S	T	L	F	K	N	F	G	N	R	L	Q	R	D	L	K	R	I	V	D	E	R	G	V	D	V	N	V	I	S	H	K	R	Q	R	N	A	V	W
Template Known Secondary structure			G	G	G	T		S	S			S												T	S																S	G	G	G		S	T	T	T	T												T	T											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		242	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	A	V	I	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	G	S	L	L	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions