Job Description P39383 Confidence 98.70% Date Thu Jan 5 12:00:15 GMT 2012 Rank 70 Aligned Residues 167 % Identity 17% Template c3cqyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1 Resolution 2.30 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																										.																															.																.	.	.	.	.	.	.	.	.
Query SS confidence																										.																															.																.	.	.	.	.	.	.	.	.
Query Sequence		A	R	F	L	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	.	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	.	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	.	.	.	.	.	.	.	.	.
Query Conservation																										.																															.																.	.	.	.	.	.	.	.	.
Alig confidence																										.										.	.	.	.						.												.																.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.						.
Template Sequence		Q	T	F	A	Q	V	G	K	K	R	V	I	L	N	I	G	G	I	A	N	I	T	Y	L	P	G	N	S	E	E	V	L	G	F	.	.	.	.	D	T	G	P	G	.	N	T	L	I	D	A	W	V	Q	Q	V	K	N	E	S	Y	D	K	N	G	A	W	A	A	S	G	K	T	D	P	Q	L	L	A	Q	L
Template Known Secondary structure							T	T									S	S									S	S	S	S						.	.	.	.					S	.	S														S	S		G	G	G						S
Template Predicted Secondary structure																																				.	.	.	.						.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
										153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	P	H	A	I	T	S	M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	.	.	G	V	A	P	E	A	I	L	A	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	A	P	I	L	F	T	G	G	V	S	H	C	Q	K	F	A	R	M	L
Query Conservation		.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		L	S	H	P	Y	F	S	L	A	Y	P	K	S	T	G	R	E	L	F	N	Q	A	W	L	E	Q	Q	L	S	A	F	N	Q	L	N	E	E	D	I	Q	S	T	L	L	D	L	T	C	H	S	I	A	Q	D	I	L	K	L	A	Q	E	G	E	L	F	V	C	G	G	G	A	F	N	A	E	L	X	Q	R	L
Template Known Secondary structure			T		G	G	G	G	S		S	S					S	S	S	S	S								T	T	T		T	T	S																										S	S							S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		223	.	.	.		.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure						.										.	.	.	.
Query SS confidence						.										.	.	.	.
Query Sequence		E	S	H	L	.	R	M	P	V	N	T	H	P	D	.	.	.	.	A	Q	F	A	G	A	I	G	A	A	V	I	G	Q	R	V	R	T	R	R
Query Conservation						.										.	.	.	.
Alig confidence						.										.	.	.	.
Template Conservation
Template Sequence		A	A	L	L	P	G	Y	R	I	D	T	T	S	A	L	G	V	D	P	K	W	A	E	G	I	A	F	A	W	L	A	X	R	Y	Q	L	G	L
Template Known Secondary structure						T	T						G	G	G	G	T			T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions