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Job DescriptionP39383
Confidence99.81%DateThu Jan 5 12:00:15 GMT 2012
Rank10Aligned Residues245
% Identity22%Templatec2v7yA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:chaperone protein dnak; PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MAYSIGIDSGSTATKGILLADGV. . . . . . . . . . . . . ITRRFLVPTP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIE
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   34.....40.........50..... ....60.. .......70.........80.........90.
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Query Sequence  . . . FRPATAITEAWETLREGLETTP. . . . . . . FLTLTGY. . . . . . . . . . . . GRQLVDFADKQVTEISCHGLGARFLAPAT
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Template Sequence  GKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEED
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   92 .......100........ .110.........120.........130.........140.........150.........160........
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Query Sequence  R. . AVIDIGGQDSKVIQLD. DDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMCTVFAESEA
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Template Sequence  QTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYL. . . VNQFKQEHGIDLSKDKMALQRLKDAAEK
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   161........170.........180.........190.........200......... 210.........220.........230.......
 
   169170........ .180.........190.........200... ......210.......
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Query Sequence  ISLRSAGVAP. . . . . . . . . . . . . . . . . . . . . . . . . . . EAILAGVINAMARRSANFIARLSCE. . . . APILFTGGVSHCQK
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Template Sequence  AKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPA
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   218.220.........230.........240........
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Query Sequence  FARMLESHLRMPVNTHPDAQFAGAIGAAVIG
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Template Sequence  VQEAIKRELGKEPHKGVNPDEVVAIGAAIQG
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   318.320.........330.........340........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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