Job Description P39383 Confidence 98.63% Date Thu Jan 5 12:00:15 GMT 2012 Rank 73 Aligned Residues 242 % Identity 21% Template c2p9lA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:actin-like protein 3; PDBTitle: crystal structure of bovine arp2/3 complex Resolution 2.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																																								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	I	T	E	A	W
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	V	V	D	C	G	T	G	Y	T	K	L	G	Y	A	G	N	T	E	P	Q	F	I	I	P	S	C	I	A	I	K	E	V	M	K	G	V	D	D	L	D	F	F	I	G	D	E	A	I	E	K	P	T	Y	A	T	K	W	P	I	R	H	G	I	V	E	D	W	D	L	M	E	R	F	M	E	Q	V	I
Template Known Secondary structure									S	S							T	T		S	S		S					S										S	S	G	G	G					G	G	G	G	T	S		T	T						S			T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		E	T	L	R	E	G	L	E	T	T	P	F	L	T	L	T	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Q	L	V	D	F	A	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	.	.	.	.	A	V	I	D	I	G	G	Q	D	S	K	V	I
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		F	K	Y	L	R	A	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	T	P	E	N	R	E	Y	T	A	E	I	M	F	E	S	F	N	V	P	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	Q	V	G	E	R	T	L	T	G	T	V	I	D	S	G	D	G	V	T	H	V	I
Template Known Secondary structure			T	T	T				G	G	G									S	S																T	S			S															G	G	G				S	S			S									S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																												.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S	V	E	Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		P	V	A	E	G	Y	V	I	G	S	C	I	K	H	I	P	I	A	.	.	.	G	R	D	I	T	Y	F	I	Q	Q	L	L	R	D	R	E	V	G	I	P	P	E	Q	S	L	E	T	A	K	A	V	K	E	R	Y	S	Y	V	C	P	D	L	V	K	E	F	N	K	Y	D	T	D	G	S	K	W	I	K	Q
Template Known Secondary structure					T	T				G	G	G					S			.	.	.														T	T						G	G	G																	S												S	G	G	G	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		M	C	T	V	F	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	G	V	I	N	.	.	.	.	.	.	.	.	.	.	A	M	A	R	R	S	A	N	F	I	A	R	L	S	C	E	.	.	.	.	.	.	A	P	I	L	F	T	G	G	V	S	H	C	Q	K	F	A	R	M	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	G	I	N	A	I	S	K	K	E	F	S	I	D	V	G	Y	E	R	F	L	G	P	E	I	F	F	H	P	E	F	A	N	P	D	F	T	Q	P	I	S	E	V	V	D	E	V	I	Q	N	C	P	I	D	V	R	R	P	L	Y	K	N	I	V	L	S	G	G	S	T	M	F	R	D	F	G	R	R	L
Template Known Secondary structure							S	S	S										T								T	T	T		G	G	G	T		T	T																S																S	G	G	G		S	T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		223	.	.	.																					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I	G	A	A	V	I	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	D	L	K	R	T	V	D	A	R	L	K	L	S	E	E	L	S	K	P	K	P	I	D	V	Q	V	I	T	H	H	M	Q	R	Y	A	V	W	F	G	G	S	M	L	A
Template Known Secondary structure																			T														T	T	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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